Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0378 ATGGACTTTCTCAGAGAAATAGAAGGGAAGAGAGCTCATGACCCTATTTTTAATGACAAGGCCATGAGCTGCGGCAGAAGTTTAATTCTAGGACCGGTGATCGTCGGAGCTGGACCGTCGGGGCTGGCCACGGCTGCGTGCCTGAAAGAGAAAGGAGTGCCCAGTGTAATTCTAGAGAGATCCAACCGCATAGCTTCTCTGTGGCAGCTAAATACCTACGATCGACTCTGCCTCCATCTCCCTAAGCAGTTCTGCGAACTCCCGCTGATGCCTTTCCCGGAGAATTTCCCGACTTACCCAACTAAGCAGCAGTTTATAGAGTACTTGGAGGCATACGCGGAGCGGTTCGATATACAGCCAAGGTTCAACGAGTCGGTGGCGCGTGCAGAGTACGACCACACGCTTGGGTTTTGGCGCGTGAAAACCGAGACAACGGAGTATCTGTGCCGATGGCTGATAGTGGCCACCGGAGAGAATGCAGAGGCGGTGGTGCCGGAGATTGAAGGGAGGAGAAAGTTTGGCGGGCCAATAGTGCATACAAGTTCGTATAAAAGCGGAGATGTGTACAGAGGGAAGAGAGTTTTGGTGGTTGGTTGTGGGAATTCAGGAATGGAGGTGTGTTTGGACCTCTGCAATCATAATGCTAGGCCTTCTCTTGTGGTCAGAGATTCAGTGCACATCCTACCACGACAGATGCTGGGGAAATCAACTTTTGGGCTGTCCATGTGGTTGCTCAAGTGGCTGCCCATGCGCCTTGTCGATCACCTCCTGCTGATCGTGTCTCGGTTCATGCTCGGTGACACGGCCAAATTCGGATTGGACCGCCCTAAATTGGGTCCCCTTGAACTCAAAAACTTGTCCGGAAAGACGCCGGTGTTGGATGTAGGGACACTTGCTAAGATCAAAAGTGGAGACATTAAGATATGTCCAGGCATCAGGCAACTGAAGTGTCATGCTGTGGAGTTTGTTGATGGAAGAACTGAGAATTTTGATGCTATAATCTTTGCAACTGGTTACAAAAGCAATGTACCATTTTGGCTAAAGGAGAGAGATTTGTTTTCAGAGAAAGATGGGCTACCTCGGAGGCCATTTCCAAATGGTTGGAAAGGCAATTGTGGGCTATATGCAGTGGGGTTCACTAAGCGCGGCCTGCTTGGCGCGTCAATGGACGCCAAACGAATCTCAGAAGACATTGAACGGTGTTGGAAAGCTGATGCAAAACGTCTTACAGTGAAATCACATACATGA 1248 0.4992 MDFLREIEGKRAHDPIFNDKAMSCGRSLILGPVIVGAGPSGLATAACLKEKGVPSVILERSNRIASLWQLNTYDRLCLHLPKQFCELPLMPFPENFPTYPTKQQFIEYLEAYAERFDIQPRFNESVARAEYDHTLGFWRVKTETTEYLCRWLIVATGENAEAVVPEIEGRRKFGGPIVHTSSYKSGDVYRGKRVLVVGCGNSGMEVCLDLCNHNARPSLVVRDSVHILPRQMLGKSTFGLSMWLLKWLPMRLVDHLLLIVSRFMLGDTAKFGLDRPKLGPLELKNLSGKTPVLDVGTLAKIKSGDIKICPGIRQLKCHAVEFVDGRTENFDAIIFATGYKSNVPFWLKERDLFSEKDGLPRRPFPNGWKGNCGLYAVGFTKRGLLGASMDAKRISEDIERCWKADAKRLTVKSHT* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0378 415 Gene3D - 31 404 IPR036188 -
Vvi4g0378 415 SUPERFAMILY FAD/NAD(P)-binding domain 33 227 IPR036188 -
Vvi4g0378 415 FunFam Flavin-containing monooxygenase 32 407 - -
Vvi4g0378 415 SUPERFAMILY FAD/NAD(P)-binding domain 191 400 IPR036188 -
Vvi4g0378 415 PRINTS FAD-dependent pyridine nucleotide reductase signature 32 51 - -
Vvi4g0378 415 PRINTS FAD-dependent pyridine nucleotide reductase signature 149 167 - -
Vvi4g0378 415 PRINTS FAD-dependent pyridine nucleotide reductase signature 193 211 - -
Vvi4g0378 415 Pfam Flavin-binding monooxygenase-like 34 346 IPR020946 GO:0004499|GO:0050660|GO:0050661
Vvi4g0378 415 PRINTS Pyridine nucleotide disulphide reductase class-II signature 31 53 - -
Vvi4g0378 415 PRINTS Pyridine nucleotide disulphide reductase class-II signature 150 158 - -
Vvi4g0378 415 PRINTS Pyridine nucleotide disulphide reductase class-II signature 189 213 - -
Vvi4g0378 415 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 33 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0378 Vvi-Chr4 3247689 3250173 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0378 K11816 - vvi:100252539 857.055