Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0372 ATGAAGCTGTTGAGGCTGTGGAAATGGTATCAGGATTGTTTGGCTGTACATCCAGTGAAGACCCAGATCATTAGCTCTGGTTTGATTTGGGGGTTTGGTGATATATGTGCGCAGACCATCACTCATACCACAGCTAAGAGACATCACCAAATTGGATCTCTTTTCATAAAACAGGATGAAGATAAGGAATTAAAGATCAATTGGAGGCGAGTGGCCACCACAAGCTTGTTTGGGTTTGGATTTGTTGGACCAGTTGGCCACTTCTGGTATGAAGGATTGGACCGATTGATTAGGCATCGACTTCAACTGCAACCAAAATCCTTCCGGTTTGTGGCTGCTAAAGTAGCAATTGATGGGATCATTTTTGGGCCCTTGGATCTACTTGTGTTTTTCAGCTACATGGGGTTTTCTACTGGGAAGAGTGTTGCTCAAGTTAAGGAAGATGTGAAGAGGGATTTTCTTCCAGCCTTGATTCTGGAAGGGGGAATATGGCCCATTGTTCAGGTTGTGAATTTCCGTTTCATTCCCGTAAGGTACCAACTCCTCTACGTCAACTTCTTCTGTTTGTTGGACAGTTCATTTTTGTCATGGGTTGAGCAGCAGCAAGATGCTCCTTGGAAGCAATGGTTCACATCTTTCCTGGCTCTAAAAGAAAAAGAAGGCCAAGGTGGATGA 675 0.4415 MKLLRLWKWYQDCLAVHPVKTQIISSGLIWGFGDICAQTITHTTAKRHHQIGSLFIKQDEDKELKINWRRVATTSLFGFGFVGPVGHFWYEGLDRLIRHRLQLQPKSFRFVAAKVAIDGIIFGPLDLLVFFSYMGFSTGKSVAQVKEDVKRDFLPALILEGGIWPIVQVVNFRFIPVRYQLLYVNFFCLLDSSFLSWVEQQQDAPWKQWFTSFLALKEKEGQGG* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0372 224 Pfam Mpv17 / PMP22 family 136 196 IPR007248 GO:0016020
Vvi4g0372 224 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 6 198 IPR007248 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0372 Vvi-Chr4 3192080 3196074 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0372 9 202 Miscellaneous Gene Families AT2G14860 26.804 1.52e-19 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0372 K13348 - vvi:100257619 441.039