Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0369 ATGGGGCAGTTTCAGCAACTGCTGGCACATAGACCATGTACAATCAAGCTCATGCCCATGCCCTCAGCCTCTCTCCTTCCCATCAACGCCGCCTTCTCAAAGCTTCCCACCTCTTCTTCTCTCAGATTCACCCCGCCCACTCGCCTTCTTCCTATCTCGGCCGCCCCATCTCGTTTTGTCTGCAAGATGAACGGTTCAGATTTGACATCGCAGATGGAACTTGGGAAGTCAGGCGGAAAATGGAAACCACAGAGGCAAGTGAATGGAATATTCTGGATCATTCTTCTTAATCTTGGAATATTTGTGGCAGATCATTTATTTCAGGTTCGGGCCATCAAAACCCTATACTTGTATCACAATTGGCCTGCTTGGTACCAGTTTGTGACGGCAACATTCTGTCATGCTAATTGGAACCATCTTTCCAGCAACCTCTTCTTTTTGTATATTTTTGGAAGACTGGTTGAAGAGGAGGAAGGAAACTTTGGGTTGTGGCTTTCTTATATTCTTACAGGTGCTGGAGCAAACCTTGTCTCGTGGTTGGTTCTACCCAGAAATGCAGTTTCTGTTGGAGCCTCGGGTGCTGTTTTTGGCTTATTTGCAATTAGTGTCCTTGTTAAGATATCCTGGGACTGGAGGAAGATACTTGAAGTACTCATATTGGGCCAATTTGTTATAGAGAAGGTGATGGAAGCAGCCCAAGCTTCAACAGGATTGTCAGGCACTTTCCTTGGAGGCTATTCCATACAGAGCATCAATCACATCGCACATCTGTCTGGCGCTCTTATTGGTGTGCTTCTTGTATGGCTTCTCAGTAGAGTTCCTTCTCAACCTTCCAATCAAGAAGTATCAACCTTGCATACAAAAACAGACACAACTCAATAA 882 0.4535 MGQFQQLLAHRPCTIKLMPMPSASLLPINAAFSKLPTSSSLRFTPPTRLLPISAAPSRFVCKMNGSDLTSQMELGKSGGKWKPQRQVNGIFWIILLNLGIFVADHLFQVRAIKTLYLYHNWPAWYQFVTATFCHANWNHLSSNLFFLYIFGRLVEEEEGNFGLWLSYILTGAGANLVSWLVLPRNAVSVGASGAVFGLFAISVLVKISWDWRKILEVLILGQFVIEKVMEAAQASTGLSGTFLGGYSIQSINHIAHLSGALIGVLLVWLLSRVPSQPSNQEVSTLHTKTDTTQ* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0369 293 PANTHER RHOMBOID-RELATED PROTEIN 51 279 - -
Vvi4g0369 293 SUPERFAMILY Rhomboid-like 86 274 IPR035952 -
Vvi4g0369 293 Pfam Rhomboid family 124 272 IPR022764 GO:0004252|GO:0016020
Vvi4g0369 293 FunFam Rhomboid protease aarA 85 275 - -
Vvi4g0369 293 Gene3D - 84 277 IPR035952 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0369 Vvi-Chr4 3178464 3181882 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0369 - - vri:117912121 570.466