Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0361 ATGGCTTCCTCCTACGACCATGAGGACGTCCAATCTCAATCCCAAGTCGACCCTCTGGGCTACGACCCTAACTACGTTCCCGACTCCGTCAGGACCTTCGTGGTCCACCTCTACCGCCACATTCGTGAGAAGAACGTCTACGAAATCCACCAGATGTACGAGTCCTCCTTCCAAACCCTCTCTGACCGCCTCTTCAAGGAGACCCCTTGGCCCTCCGTCGACGCCGTCGCTCACCACGTCGACAACGACCATGTTTTCTGCCTCCTCTACCGAGAGATGTGGTACCGCCATCTCTATGCCCGCCTCTCCCCCACCGCCAAGCAGCGGATCGATTCGTGGGACAATTACTGCTCTTTGTTTCAGGTGGTGTTACATGGAGTGGTCAACATGCAGTTGCCAAACCAGTGGCTCTGGGACATGGTTGATGAGTTTGTGTACCAGTTTCAGAGCTTTTGCCAGTACAGGGCCAAGATGAAGAACAAGACAGAGCAAGAGATTGCCCTTTTGAGGCAGTATGATCAGGCTTGGAATGTGTATGGTGTGCTCAACTTCTTGCAAGCACTTGTTGAGAAGTCCATGATCATTCAGATCTTGGAGCAGGAGAAGGAAGGACTTGAACAGTTCACCGCTACCGATGGATATGATTACAATGGTGGAAGTAATGTCTTGAAAGTGCTGGGATATTTCAGCATGGTGGGCTTGCTTCGAGTTCATTGTCTTTTGGGTGATTATCATACGGGTCTGAAGTGCTTACTCCCCATTGACATTAGTCAACAAGGTGTTTACACCAGTGTTATTGGAAGCCACATTACAACCATTTATCATTTTGGGTTTGCCAATCTTATGTTGCGGAGGTATGTGGAAGCCATTCGGGAGTTCAACAAGATTCTTCTATACATTTACAAGACCAAGCAATTTCATCAAAAATCTCCACAGTATGAGCAAATACTAAAGAAGAATGAGCAGATGTATGCCTTACTGGCAATTTGTCTCTCACTTTGCCCCCAAGAGCAGCTTGTTGAGGAGACTGTACAGTCTCAGTTGAAGGAGAAGTATGGTGAGAAGATGAATAGAATGCAGAGATATGATGATGAAGCATTTGCTCTCTATGATGAGCTCTTCTCATATGCATGTCCCAAGTTCATTACCCCCTCAGCTCCTGTTTACGAGGAGCCTCTTGTAAATTACAACCAGGAAGCTTATAGACTTCAGTTGAAGCTGTTCCTTTATGAAGTGAAGCAGCAACAGTTATTATCAGGTGTCCGTACCTTCTTGAAAGTATATTCGACCATCTCTCTTGGGAAGCTTGCGACGTACATGGAAGTGGATGACCCCACACTAAGGACAATTTTGATGACATATAAACACAAAACACATGCCGTTGATTCCGATGGAAAAATTGGCTCCAATGCTGATGTTGATTTCTACATTGATGATGATATGATTCATGTTATTGAATCCAAACCAACCAAGCGATATGGGGACTACTTCATGCGTCAAGTTGTTAAGCTTGAAGGATTGATGAACGATATGGACAGGGTAAAGCTTGACTGA 1554 0.4582 MASSYDHEDVQSQSQVDPLGYDPNYVPDSVRTFVVHLYRHIREKNVYEIHQMYESSFQTLSDRLFKETPWPSVDAVAHHVDNDHVFCLLYREMWYRHLYARLSPTAKQRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWDMVDEFVYQFQSFCQYRAKMKNKTEQEIALLRQYDQAWNVYGVLNFLQALVEKSMIIQILEQEKEGLEQFTATDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLLPIDISQQGVYTSVIGSHITTIYHFGFANLMLRRYVEAIREFNKILLYIYKTKQFHQKSPQYEQILKKNEQMYALLAICLSLCPQEQLVEETVQSQLKEKYGEKMNRMQRYDDEAFALYDELFSYACPKFITPSAPVYEEPLVNYNQEAYRLQLKLFLYEVKQQQLLSGVRTFLKVYSTISLGKLATYMEVDDPTLRTILMTYKHKTHAVDSDGKIGSNADVDFYIDDDMIHVIESKPTKRYGDYFMRQVVKLEGLMNDMDRVKLD* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0361 517 Hamap Eukaryotic translation initiation factor 3 subunit L [EIF3L]. 10 506 IPR019382 GO:0003743|GO:0005737|GO:0005852
Vvi4g0361 517 ProSiteProfiles PCI domain profile. 292 491 IPR000717 -
Vvi4g0361 517 MobiDBLite consensus disorder prediction 1 22 - -
Vvi4g0361 517 MobiDBLite consensus disorder prediction 1 19 - -
Vvi4g0361 517 Pfam RNA polymerase I-associated factor PAF67 108 503 IPR019382 GO:0003743|GO:0005737|GO:0005852
Vvi4g0361 517 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 21 516 IPR019382 GO:0003743|GO:0005737|GO:0005852
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0361 K15029 - vvi:100261248 1058.9