Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0359 ATGGCTTTTCTCTCAACTCCCCCTTTTGCTTCCACTGCTTATCCGGCCAAATTCAGTCATCATTCACTCGATTCACCAGTCTTTACTCCAAGATTTTCAGTTTTAGGACTTGGGTTTCGAAGTATCTCCCATGGGGTGGTGGTTAGAAACTCTAATCAAGCTGAACCTTTGGTTGATTCCACTCAAATAGCTGATGTTCCACTGTTGTCTTGTTTGGAGGCCATTGAAAGGCTAAAAACAAGCCAAGAAAACCAAAAAAGCAAGCAGCAATACCTGGCCATGTATTCTAGCATTTTTGGTGGAATCACAACAGATAAAGCAGCCATGGTGATTCCTATGGATGACCACATGGTCCATCGAGGTCACGGAGTCTTTGATACTGCAGCAATAATGGATGGATATCTCTATGAGTTGGACCAGCACCTAGACCGTTTTCTAAGGTCAGCATCCATGGCCAAAATCAATCCCCCTTTTGATAGAGAAAGCATAAGAGGAATACTCATACAGACAGTAAGCGCTTCCAAATGTAGAAAGGGTTCACTAAGGTACTGGCTTTCAGCAGGACCTGGTGATTTCCAACTATCTCCATCAGGCTGCCAACAATCAGCTCTTTATGCAATTGTAATACAAGATCTATCTCCTTTTGATCAGAAAGGCATTAAGGTGGTAACTTCATCAGTCCCCATAAAAACCCCTCAATTTGCTACCATGAAGAGTGTGAATTACCTGCCAAATGTGCTTTCAAAGATGGAAGCTGAAGAAAATGGTAGCTATGCAGCAATTTGGCTAGACGATGACGGGTTTATTGCTGAAGGACCTAACATGAATGTGGCTTTTGTTACAAAGGAAAAAGAACTTGTGATGCCCCACTTCGATAAAATTCTTAGTGGGTGCACAGCTAAGAGAGTTTTGGCTCTTGCTGAGGGGTTAATGAGGGAGGGGAAGCTTCAGGGAATTAGAGTGGGAAATTTGAGTGTGGAGGAAGGGAAGAAAGCAGATGAGATGATGCTTATTGGCAGTGGAGTTCTCGTTCGGCCTGTATTGCAGTGGGACGAACATGTTATCGGTGATGGTAAAGAAGGTCCTGTGACTTTGTCTCTCTTGAATCTTATTCTGGATGACATGAAGTCTGGTCCCCCTACCGTTCGAGTACCTGTTCCTTATTAA 1167 0.4344 MAFLSTPPFASTAYPAKFSHHSLDSPVFTPRFSVLGLGFRSISHGVVVRNSNQAEPLVDSTQIADVPLLSCLEAIERLKTSQENQKSKQQYLAMYSSIFGGITTDKAAMVIPMDDHMVHRGHGVFDTAAIMDGYLYELDQHLDRFLRSASMAKINPPFDRESIRGILIQTVSASKCRKGSLRYWLSAGPGDFQLSPSGCQQSALYAIVIQDLSPFDQKGIKVVTSSVPIKTPQFATMKSVNYLPNVLSKMEAEENGSYAAIWLDDDGFIAEGPNMNVAFVTKEKELVMPHFDKILSGCTAKRVLALAEGLMREGKLQGIRVGNLSVEEGKKADEMMLIGSGVLVRPVLQWDEHVIGDGKEGPVTLSLLNLILDDMKSGPPTVRVPVPY* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0359 388 FunFam D-alanine aminotransferase 213 378 - -
Vvi4g0359 388 FunFam D-amino-acid transaminase, chloroplastic 70 209 - -
Vvi4g0359 388 Gene3D - 215 378 IPR043132 -
Vvi4g0359 388 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 100 376 IPR036038 GO:0003824
Vvi4g0359 388 Gene3D - 71 210 IPR043131 -
Vvi4g0359 388 PANTHER AMINO-ACID AMINOTRANSFERASE 81 380 - -
Vvi4g0359 388 Pfam Amino-transferase class IV 123 349 IPR001544 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0359 Vvi-Chr4 3080702 3083188 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0359 K18482 - vvi:100266456 772.311