LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vvi4g0352	ATGGAGGAGTGTGTTTTGGCTGAGGCGAGTCATCAGAGAGGAGATTCCATTCTTACATCCAAGCCTAACAGACCACTTGTTAAGATTGACTCCATATCTATTGATCTGATCAGTGCTGATGAGAAGAATGAGGCAGAAAAGTGTCAACATTTCTCAATACGTGGATATGTGGCTGAAGTTCGGAAAAGAGACAAGAAGATTTGTTGGCCATTTGCCTTGGATGAAAGCCATAATAAGTTGGAGGAGCAAACTTGCATCCTTCCTCCTCTAGATGTGCCCAAATTTAGATGGTGGCATTGCCAAAATTGTCTTCAGGAGATTGGCACCAAGGCTTCTGAGAAGGAAATTGCAACGGTTCCTAGCTGTAATAACACTGTATATAAATCCAATGGAACTTGTTTGCACATGACATCCCGTGGTGCTGAGACGGTGTTGCTTTTAGATTATCCAAGAGCTTTGAATGTGGACATTTCTGAGGGAAGAAAAGTTGATGCTAGCACTTCTGGAAATGTGAATGACAATGAGCATCATGTTTCATTATGTAGTGATAAGCAAGACAAGCAAGCTGAGGTTGCATGTAGCATCATCATAGGTGATGAGAATCGCTCAGAAGAAGATGCAGATCAGGTTATTCCTGAACCACCTTGTGGTGCAGCAAAAGTGAATCCATGCCTGCTGATGGAAAAACAAGCAGGTGACACAGTGGCTCTTGAATTGAACTGCAATGGAGTTTATGAAGTTGCTGATATTGGGCTTTCTGTTGGAAAAATGAAATACATGGTCAACAGCTCTGATGAAACTTGTCAAATGGGAAAGCATACTTCAATGGATGATCAGAACAACACAGCTTGGGGTTCGTCCAAGGTAGTTCCTGCAGTTGGTGTGGTTGATGAAGCTCTTAACTCTGTCAGTGTCCTTAAAAATGATTGTCCGCTACTGGAATTAGATGACTCTGATCAAGCATCATCTGAGAGTGATGAAATTTTGATTAAAAACAGCTTCAATCGGCAACATGATAATTCAAGTGGTTGGCGTCGTAGAAAATCTCGAAAGGTGCGTTTGCTGACAGACTTGTTGGGTGCAAAAGAAAATAATTCTACCTCCAATGCAGTGATTGATGCATCCACCAGCACAGATTCACTTTCCGTTCCCCAAGGTGAAGTAGCTGTCCAAGGAAATGCTAGAAGGGGTTTTAGGGGACAGAATAGGAAGAGGAAGATGTTTCAAGATGAAGACTGGAGACCCCCTGAGATAAGCTATCAAAATGATGCGAATAAAAAGTTTAGGACATTCAAAGGAGATGTGGAAATAACTGATATCAACATTGCAATTGACAATGCTGAATCAGAAGAAGATGGACCTGCTGGAATTGGTTCACAAACTGGTGTAAAGACTCATTGGACCAGACCCAAAATTGATAGAATATCTGGTCCCAATAAGAAGAAGAATAAGAAGACCTCAGTAGATGATGGATGCTCTTCATTATTGCCTCCACAAGTAGCGACTGGCAGAGAAATTCAGGACAAAAATGGGGATGCAGATGTAGGCAAGGCTACTGATGCTGTTTTATCCAAATCACCACATGATGCATTTGCGGGTAAAAGAATTGAGGCTTTTCTTAAAAATTTGCCTGCACAGCAAACTGAGGGAAAATCTAATTTGTCTAAGAAGAAAAATAAGATGCCTCTAGTTGAAGAGGGAGAGGCTTCTTTAATGCCTTGGAAAAGTGGAGTCATCAGCAAAGATCAAATCACTAGGAAGGAAGTAGAATATTTGCAGTGCACGACTCAAACTGTTCCATTTCAATCAGTACAAGATCATTCCGCTGGAAAAGATCTGCAACTTTTTCTCAATAGCTTGGCTGCACAGAGAAAAGATGATGCAAAATATGTTGCACCGGTTGAAGATGGGTTAGCTCTCTTTTTATCGCAACAAGAGAACCTTCACAGAGAAGATGTAGTTATGAGGAAAGATGTGGAAAGAAAGCAGCATATTGGAGGTTCAAGTATTCCTTTTAAACCTGTACCAGATGGATTATTTGGGGTAGGGGTGAATCGTGATATCAATGGTAAGAGAACTACTCATGGAATCCCTTTCCTGAGTGAAAAACAAAATTGCTCCCCCAGTGTTGAAGATTGGAGTTCTTCTTTGAAGCAGAAAGTGGATTTCTCTGGGAAATGCAACAAGGAGAAAGCTATAGAAGTTCAAGAACTTTCAGAAGCTAATAGAAAGCACAGTGACCACAGAGTTAATGAAGTATTTGAACAAGGAACTTCAGATGACATACCTATGGAAATTGTTGAACTCATGGCAAGAAATCAGTACGAGAGGTGTCTTTCTGAAACTAGAAATGATTATCATCTTTCAGAGACAACCAATGACACAAGGAATGCTGGAATGCTGGATTTCACTAAAGTATATGCTAATGGGGCATTCAGATTGTTGCAGGAGGAAAACAGCCACAGGCAAAAACCTCAGTCCAGCTATGGAAGAAATAGTATGTTCACAACAGCTGAAAATGTAGGATCCAGCAGAGAGAAGTCAGGTAGTTATTTTTCTCATTTTAGCAGTAGGAACCATTTCAATATGGCTCAACCAGAAGGAACTCATGGCTCTACTGGGGTTATAGCATTTCCAGTGTGTCAAGAGAAGCCATCTAGTGGTGTTCAATTTTCTTGTCCTGGTCCCAGCCGACATAATGGTGCTTCAAATTGCAAGTGGAGTAGAGATATGGTGGGGCAGAGGTCTTCTCATACTAGTTTGCATGCCTTTGAAGCATACAATGCATGCTACAACGCTCCTCAACAGAGTGAAGAAGCTGCTCATGTTTGGTCAGCCATGACACCAAATCACATGGCTTTTGGATTCAGCATTCCTCAAGAATGTGCAACTCATTCAAATAACATGGATATGATTTCACATTCGTCAAACATGCTTCACAAAAGAAAAATGACTGGCGAACAAGATCTGAAGTTCTTAAATTCAAATGCTTTTGACCTTGAAAAGCAGAACAGGAGCATTGGTTCTGAAACTTTGAACAGAGCACATGTGGAATATCCGTTTGCTTGCAAAGATAATGGGATCAAGCTTCATCCAAAGCTCGTGGGGTCTTTAGATCTGTATTCCAATGAAAACATACCAGCTATGCATTTACTTAGCCTCATGGATTCAGGGATGCAATCAAGGACCCCCTTCAGTATGGATGGAGATTCAAAATTCCTTAAGAAATCTGCTTTTCCTCGTGATTATGACTCTAGGGAGTTCTCAGGCCTGGAGATTGGTGCATATAAGGCCAGAAATTCCTCAAGACAACCATCATCTGATCATTGTGGTAAAAATCACCTTGCAGAAAGATCCTGTGCGTGTTCTCTTGCTGTTACGTCAGTTGGTGCCTTTGCTTCTTCAAGTCAAAAGGATGGGAATTTTAAGCCTGCTGGTTTAATAGATCAAGTTCTCCCAAGATCTCGAGGAAAAGAGAAATCAAAAGTACTTCCTCCACCTATTCAGAACAGAGGCTGCACATCAAGAAAATCTTCATCCACATGTGGTGATTATTCTGGCACAAATCATGAATCTATCCCTATCCATGATACGCAGAAAAGGTTCCCTGGTGCTTCCAACTCAATGAGGTTTCCTTTGCAACCTCACACGATTGAAAATTCAATTGAATGCATTGCATTGGAGACCCACTGTAATGGTGGAACTTTTTGGCCTATCAACAGCAGGTCTGAGACGGAAATCTGCAGCATTAACAAAAATCCAGCTGATTTTAGTGTGCCAGTAGCAGGAAATATCTATATGATTGGTGCTGAAGATCTGAAATTTGGAAAATCAATTTCTTCTGAGAATAGAAATGGCTTAATCAATGTGGATGGGCACAAGAAAAAGAGGGTTGTAAAGCTCACTTCTGTAAAAGAACGTGCTCGACGCCGAATTGCATGA	3942	0.4107	MEECVLAEASHQRGDSILTSKPNRPLVKIDSISIDLISADEKNEAEKCQHFSIRGYVAEVRKRDKKICWPFALDESHNKLEEQTCILPPLDVPKFRWWHCQNCLQEIGTKASEKEIATVPSCNNTVYKSNGTCLHMTSRGAETVLLLDYPRALNVDISEGRKVDASTSGNVNDNEHHVSLCSDKQDKQAEVACSIIIGDENRSEEDADQVIPEPPCGAAKVNPCLLMEKQAGDTVALELNCNGVYEVADIGLSVGKMKYMVNSSDETCQMGKHTSMDDQNNTAWGSSKVVPAVGVVDEALNSVSVLKNDCPLLELDDSDQASSESDEILIKNSFNRQHDNSSGWRRRKSRKVRLLTDLLGAKENNSTSNAVIDASTSTDSLSVPQGEVAVQGNARRGFRGQNRKRKMFQDEDWRPPEISYQNDANKKFRTFKGDVEITDINIAIDNAESEEDGPAGIGSQTGVKTHWTRPKIDRISGPNKKKNKKTSVDDGCSSLLPPQVATGREIQDKNGDADVGKATDAVLSKSPHDAFAGKRIEAFLKNLPAQQTEGKSNLSKKKNKMPLVEEGEASLMPWKSGVISKDQITRKEVEYLQCTTQTVPFQSVQDHSAGKDLQLFLNSLAAQRKDDAKYVAPVEDGLALFLSQQENLHREDVVMRKDVERKQHIGGSSIPFKPVPDGLFGVGVNRDINGKRTTHGIPFLSEKQNCSPSVEDWSSSLKQKVDFSGKCNKEKAIEVQELSEANRKHSDHRVNEVFEQGTSDDIPMEIVELMARNQYERCLSETRNDYHLSETTNDTRNAGMLDFTKVYANGAFRLLQEENSHRQKPQSSYGRNSMFTTAENVGSSREKSGSYFSHFSSRNHFNMAQPEGTHGSTGVIAFPVCQEKPSSGVQFSCPGPSRHNGASNCKWSRDMVGQRSSHTSLHAFEAYNACYNAPQQSEEAAHVWSAMTPNHMAFGFSIPQECATHSNNMDMISHSSNMLHKRKMTGEQDLKFLNSNAFDLEKQNRSIGSETLNRAHVEYPFACKDNGIKLHPKLVGSLDLYSNENIPAMHLLSLMDSGMQSRTPFSMDGDSKFLKKSAFPRDYDSREFSGLEIGAYKARNSSRQPSSDHCGKNHLAERSCACSLAVTSVGAFASSSQKDGNFKPAGLIDQVLPRSRGKEKSKVLPPPIQNRGCTSRKSSSTCGDYSGTNHESIPIHDTQKRFPGASNSMRFPLQPHTIENSIECIALETHCNGGTFWPINSRSETEICSINKNPADFSVPVAGNIYMIGAEDLKFGKSISSENRNGLINVDGHKKKRVVKLTSVKERARRRIA*	1314

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vvi4g0352	1313	MobiDBLite	consensus disorder prediction	449	513	-	-
	Vvi4g0352	1313	MobiDBLite	consensus disorder prediction	467	488	-	-
	Vvi4g0352	1313	PANTHER	PROTEIN EMBRYONIC FLOWER 1	1	1306	IPR034583	GO:0009910\|GO:0045892\|GO:0048367
	Vvi4g0352	1313	MobiDBLite	consensus disorder prediction	1143	1197	-	-
	Vvi4g0352	1313	MobiDBLite	consensus disorder prediction	1171	1193	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vvi4g0352	Vvi-Chr4	3009613	3015332	Tandem

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vvi4g0352	-		-	vvi:104878998	2640.14