Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0350 ATGGGGAATCATGGGTGGTTGCTGGGCTTCTTGCTGAATTTTTTGTTGTGGGGTTCAGCCCTTGTGCCCATCCATGGCATGCCGCCGCCGTCACCGGTGCAGTGCAACGGCAGTGCTGGTTGCATCCTGAGAAACTCCTACGGTGAGTGGGGAGATCGAAAGGATTGTCGGGTTCTGAGCATTGCGTACCCTGAAACTGAAGAGGAGATGAGGCTGGCAGTGGCGCAGGCTAATCAGAAGAAGCAGAAGGTGAAAGTTGTTAGTGGGTTTTCACATACGATACCGAAACTGGCTTGTCCTGGGAAGGAATATTATTCTGGAAATGCAGTATTAATAAGCACAGCCAAGTTGAAATCTACCATTGAAATTGATACCGCCGAGATGGTTGTGACTGCAGACTCCGGGGTGGGGCTCCGGGATCTGATCAATAGAGTGGAAGCGGCTGGGCTGAGCCTGGTGGCGGCGCCGTATTGGGAGGGGTTAAGTGTTGGTGGGCTGATTAGTACTGGAGCTCATGGGAGCTCATGGTGGGGGAAAGGTGGGGCGGTTCATGATCATGTTGTTGGCCTCAGCCTTGTGGTTCCTGCTAAAGAATCCGAAGGATTCGCCAAGATTATCAGATTGGAAGCTCAAGATCCGCTTCTCAATGCAGCAAAAGTTTCAATGGGGATATTGGGCGCCATCTCTAAGGTGAAATTGTCACTGGAGCCAGGATTCAAAAGAAGCATAACCAATAACTTCACAGACGATGCTCATTTTGAAGATGAATTCATGGACCATGCAAAGAAACATGAATTTGCAGACATAACATGGTATCCATCAAGACGCACAGCTGTGTACAGATATGATGATAGAGTTCCTCTGAACACATCTGGTGATGGAATCAATGACTTCCTGGGCTTTCAATCCAATTCTATTCTGACCTCCAAATTGCTTCGAGCAGCAGAGAAAGCACTGGAAAATTCGCGAAGCGTGAGGGGAAAATGTGCCACGGCATCCACAGTTTTGGCTTATAAGAGACTAGTGGCCAATGGGTTGAAGAACAACAACCTAATCTTCACAGGCTATCCAGTGGTGGGTCATCAAGGGAAGATGCAGACCTCTGGTTCTTGCCTGTACTCGCCTTCAACTAGGACTGATATCACATGTGCTTGGGATCCAAGAATCAACGGCCTGTTCTTCTATGAGACAACGGCCATATTCCCAGCTACAAAATTCGCTGAATTCATCCGTGAAGTTAAGACACTGAGAGAACTAAAAATCGATAACTTTTGTGGGGTGGATATGTATAACGGGTTTTTGATTCGTTTCATCAAGGCTTCTGGGGCATACTTAGGACAAGCCGAGGACTCTGTGGTAGTAGACTTCAACTATTACCGCGCAGACAATGCTTCAACTCCAAGACTGAACCAAGATGTGTGGGAAGAAGTGGAGCAAATGGCATTCTTCAAGTATGGGGCTAAGCCACATTGGGCTAAGAATAGGAACTTGGCATTCTTGGGGGTGCAGAAAAAGTATCCCAATTTTAACAAGTTTGTTGCAGCCAAGAAACAACTTGATCCTCAGAACATTTTCTCTAGTGATTGGTCTGAGGCTATACTATTTGGGAAAGAAGCAGAGAAAGGGGATGGATGCGCCTTGGAAGGACAATGCATATGTTCAGGAGACCGCCATTGCAGCCCGGAGAAAGGGTACTTCTGCAGAACTGGGCTTGTTTACAAGGAAGCTAGGGTCTGCAGGTACTCACCATCTTCCATAGCATGGACATTTTCTAATTGA 1779 0.4733 MGNHGWLLGFLLNFLLWGSALVPIHGMPPPSPVQCNGSAGCILRNSYGEWGDRKDCRVLSIAYPETEEEMRLAVAQANQKKQKVKVVSGFSHTIPKLACPGKEYYSGNAVLISTAKLKSTIEIDTAEMVVTADSGVGLRDLINRVEAAGLSLVAAPYWEGLSVGGLISTGAHGSSWWGKGGAVHDHVVGLSLVVPAKESEGFAKIIRLEAQDPLLNAAKVSMGILGAISKVKLSLEPGFKRSITNNFTDDAHFEDEFMDHAKKHEFADITWYPSRRTAVYRYDDRVPLNTSGDGINDFLGFQSNSILTSKLLRAAEKALENSRSVRGKCATASTVLAYKRLVANGLKNNNLIFTGYPVVGHQGKMQTSGSCLYSPSTRTDITCAWDPRINGLFFYETTAIFPATKFAEFIREVKTLRELKIDNFCGVDMYNGFLIRFIKASGAYLGQAEDSVVVDFNYYRADNASTPRLNQDVWEEVEQMAFFKYGAKPHWAKNRNLAFLGVQKKYPNFNKFVAAKKQLDPQNIFSSDWSEAILFGKEAEKGDGCALEGQCICSGDRHCSPEKGYFCRTGLVYKEARVCRYSPSSIAWTFSN* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0350 592 Pfam D-arabinono-1,4-lactone oxidase 432 531 IPR007173 GO:0003885|GO:0016020
Vvi4g0350 592 Gene3D - 118 237 IPR016169 -
Vvi4g0350 592 Gene3D - 396 496 - -
Vvi4g0350 592 ProSiteProfiles PCMH-type FAD-binding domain profile. 54 238 IPR016166 GO:0071949
Vvi4g0350 592 SUPERFAMILY FAD-binding/transporter-associated domain-like 45 237 IPR036318 GO:0050660
Vvi4g0350 592 Pfam FAD binding domain 61 195 IPR006094 GO:0050660
Vvi4g0350 592 NCBIfam FAD-dependent oxidoreductase 28 580 IPR010030 -
Vvi4g0350 592 FunFam L-gulonolactone oxidase 5 119 237 - -
Vvi4g0350 592 Gene3D - 42 117 IPR016167 -
Vvi4g0350 592 PANTHER GULONOLACTONE OXIDASE 29 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0350 Vvi-Chr4 2989401 2992239 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0350 K00103 - vvi:100247576 1194.49