Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0348 ATGGCCATGGCGACTAGGGTTTTTCTGCTTCTTCTCTTAGTCTTGATATCATCGCCAAGCCCTAGTTTTTCCCTCTATGAGGACCAAGTTGGCCTCATGGACTGGCATCAACAGTACATCGGGAAAGTGAAGCACGCCGTGTTCCACACTCAAAAGGCCGGACGGAAACGCGTGGTGGTGTCGACGGAGGAGAACGTCATCGCATCTTTGGATCTCCGGCGTGGGGATATTTTTTGGAGGCATGTGCTCGGGCCCAATGATGCGGTAGATGAAATTGATATCGCCCTTGGCAAATATGTCATTACCCTTTCGTCAGAGGGAAGTATTTTAAGAGCATGGAACCTTCCTGATGGCCAGATGGTGTGGGAGTCTTTCCTTCAGGGCCCAAAGCCATCAAAATCATTATTATCAGTGTCAGCAAATTTGAAAATTGACAAGGACAATGTGATCTTTGTTTTTGGAAAAGGGTGTCTCCATGCTGTTTCAAGCATAGATGGTGAGGTGCTTTGGAAGAAGGATTTTGCGGATGAAAGCTTAGAGGTTCAACAGATAATTCACCCTCTTGGAAGTGATATGATATATGCTGTAGGATTTGTGGGTTTGTCTCAGTTGGATGCATATCAAATTAATGTTAGGAATGGTGAAGTGCTGAAGCACCGTAGTGCAGCATTTCCTGGTGGCTTTTGTGGGGAAGTTTCATTAGTTTCAAGTGACACACTTGTGGCACTAGATGCCACTAGGTCCTCTTTAATATCAATTAGTTTTCTGGATGGAGAAATCAGCTTACAACAAACACATATTTCAAATCTTGTTGGAGATTCGTTTGGGATGGCTGTCATGTTACCTTCTAAGCTTTCAGGGATGCTTATGATAAAAATCGATAACTATATGGTATTTGTGAGAGTAGCAGATGAGGGCAAACTGGAGGTTGCGGAGAAAATTAATGATGCAGCAGCAGCTGTTAGTGATGCTCTGGCACTCTCTGAGGGCCAACAAGCTTTTGGATTAGTTGAACATGGAGGTAACAAGATTCATCTCACAGTCAAGCTTGTTAATGACTGGAATGGTGATCTGCTCAAGGAAAGCATTAGAATGGACCACCAAAGGGGCTGTGTGCATAAAATTTTCATAAACAGTTATATCCGGACAGACAGGTCTCATGGGTTTAGGGCCTTGATTGTCATGGAGGATCATTCACTGTTATTACTACAACAAGGTGAGATTGTCTGGAGTAGGGAGGATGGGCTTGCCTCAATTATAGATGTAACAGCATCAGAATTGCCCGTAGAAAAGGAAGGTGTATCTGTGGCTAAAGTGGAACACAATTTATTTGAGTGGCTGAAGGGACACATGCTGAAGCTTAAAGGAACTCTGATGCTTGCAAGCCCTGAGGATATGATAGCCATACAAGGAATGAGGTTAAAAAGCTCTGAAAAGAGCAAAATGACCCGAGACCACAATGGTTTTAGAAAGTTGCTCATTGTACTTACTAGAGCAGGGAAGCTTTTTGCCTTGCACACAGGTGACGGACGGGTTGTCTGGTCTGTCTTGTTGCATTCTCTTCATAATTCAGAAGCTTGCGCATATCCCACTGGACTTAATGTGTATCAGTGGCAAGTTCCCCATCATCATGCGATGGATGAAAATCCATCTGTTCTTGTAGTTGGCAGGTGTGGACTTGGTTCAGATGCACCAGGTGTTCTCTCCTTTGTTGACACTTACACAGGGAAGGAACTTGATTCATTGTTTCTCACTCATTCCATAGAACGAATTATTCCCCTTTCATTCACAGATTCAAGAGAACAGCGCCTCCATCTAATTATAGATACTGATCACCATGCACATCTATACCCAAGAACTCCTGAGGCTATTGGTATCTTCCAACATGAGTTACCCAACATATATTGGTATTCAGTTGAAGCTGAAAATGGCATTATCAGAGGGCATGCTTTAAAGAGCAATTGCATTCTTCAAGAAGGTGATGAATACTGCTTTGACACCAGGGATTTGTGGTCAATTGTATTCCCATCAGAGTCAGAAAAGATTCTTGCAACTGTGACAAGAAAATTGAATGAGGTGGTTCATACTCAAGCTAAGGTAATAACAGATCAGGATGTGATGTACAAGTATGTATCGAAAAATCTTCTTTTTGTAGCCACTGTTGCACCCAAAGCCACTGGTGAAATTGGATCAGTTACGCCAGAGGAATCATGGTTGGTTGTATATCTTATTGATACTGTAACCGGCCGTATAATATACCGCATGACTCATCATGGTACACAAGGTCCTGTCCATGCTGTTTTTAGTGAGAACTGGGTCGTCTACCACTATTTTAATCTCAGAGCACACAGATATGAGATGTCAGTTGTTGAGATCTATGATCAGTCTCGGGCGGATAACAAAGATGTGTGGAAGCTTGTTCTTGGAAAGCATAATCTTACTTCACCTGTTTCTTCATATTCTCGACCTGAGGTCATAACGAAATCACAGTTTTATTTTTTTACCCATTCTGTGAAAGCAATGGCAGTGACATCAACTGCCAAGGGTATAACATCGAAGCAGCTCCTTATTGGTACAATTGGCGATCAGGTTTTGGCACTTGATAAGCGTTATCTGGATCCTCGTCGAACAATTAATCCTTCACAATCTGAGAGAGAAGAAGGAATCATTCCTCTGACAGATTCATTGCCAATCATTCCTCAGTCATATGTGACACACAACCTTAAAGTAGAAGGTCTGCGAGGCATAGTAACAGCACCTGCTAAGCTGGAGTCAACTACCCTTGTCTTTGCTTATGGAGTGGATCTGTTCTTCACCCGGATTGCACCCTCACGGACGTATGATTTGCTTACCGATGATTTCAGCTATGCTCTACTTCTAATTACAATAGTTGCATTGGTTGCGGCAATATTTGTAACATGGATTTTGTCTGAGAGGAAGGAACTGCAAGAGAAGTGGAGGTAA 2964 0.4275 MAMATRVFLLLLLVLISSPSPSFSLYEDQVGLMDWHQQYIGKVKHAVFHTQKAGRKRVVVSTEENVIASLDLRRGDIFWRHVLGPNDAVDEIDIALGKYVITLSSEGSILRAWNLPDGQMVWESFLQGPKPSKSLLSVSANLKIDKDNVIFVFGKGCLHAVSSIDGEVLWKKDFADESLEVQQIIHPLGSDMIYAVGFVGLSQLDAYQINVRNGEVLKHRSAAFPGGFCGEVSLVSSDTLVALDATRSSLISISFLDGEISLQQTHISNLVGDSFGMAVMLPSKLSGMLMIKIDNYMVFVRVADEGKLEVAEKINDAAAAVSDALALSEGQQAFGLVEHGGNKIHLTVKLVNDWNGDLLKESIRMDHQRGCVHKIFINSYIRTDRSHGFRALIVMEDHSLLLLQQGEIVWSREDGLASIIDVTASELPVEKEGVSVAKVEHNLFEWLKGHMLKLKGTLMLASPEDMIAIQGMRLKSSEKSKMTRDHNGFRKLLIVLTRAGKLFALHTGDGRVVWSVLLHSLHNSEACAYPTGLNVYQWQVPHHHAMDENPSVLVVGRCGLGSDAPGVLSFVDTYTGKELDSLFLTHSIERIIPLSFTDSREQRLHLIIDTDHHAHLYPRTPEAIGIFQHELPNIYWYSVEAENGIIRGHALKSNCILQEGDEYCFDTRDLWSIVFPSESEKILATVTRKLNEVVHTQAKVITDQDVMYKYVSKNLLFVATVAPKATGEIGSVTPEESWLVVYLIDTVTGRIIYRMTHHGTQGPVHAVFSENWVVYHYFNLRAHRYEMSVVEIYDQSRADNKDVWKLVLGKHNLTSPVSSYSRPEVITKSQFYFFTHSVKAMAVTSTAKGITSKQLLIGTIGDQVLALDKRYLDPRRTINPSQSEREEGIIPLTDSLPIIPQSYVTHNLKVEGLRGIVTAPAKLESTTLVFAYGVDLFFTRIAPSRTYDLLTDDFSYALLLITIVALVAAIFVTWILSERKELQEKWR* 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0348 987 FunFam Os05g0230600 protein 33 342 - -
Vvi4g0348 987 Pfam PQQ-like domain 54 241 IPR002372 -
Vvi4g0348 987 PANTHER UNCHARACTERIZED 3 987 IPR026895 GO:0072546
Vvi4g0348 987 Gene3D - 25 331 IPR015943 GO:0005515
Vvi4g0348 987 Pfam ER membrane protein complex subunit 1, C-terminal 769 986 IPR011678 -
Vvi4g0348 987 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 103 879 IPR011047 -
Vvi4g0348 987 SMART ire1_9 486 517 IPR018391 -
Vvi4g0348 987 SMART ire1_9 143 173 IPR018391 -
Vvi4g0348 987 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 34 252 IPR011047 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0348 K23562 - vvi:100264673 1937.54