Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0345 ATGAGAAACTATGAAGTTGTTGTGATGCTTCTCTGTGCTGCAATGATAATGCATGCACAAGAAGGAAATGGTGCATTAATACGAGAAGAAACCCAAGAAATGATCGATGAGGCTAACAGGAATGGACCTTATTTAGGGTTGGTCATCCCTAACCTCTTTGAGATGAACCCTCTTCTTCAATCTCCAAACTACACAGCCAGTAACCTAACCATAGATTTTGCAGGTAGAAGGTTTCGATTTGGGACCATTGCTGACAAGAAAGTCATATTGGTCATGACAGGACTGAGCATGATAAATGCAGGAATAACTACCCAGCTATTGTTGAGTACCTTTGATATAGAAGGAGTAGTGCACTATGGGATAGCTGGGAATGCAAACCCATCTCTGAATATTGGAGATGTCACCATTCCTCAGTATTGGGCTCATACTGCTCTTTGGAATTGGCAGAGGTATGGAGATGGGCCTGAGGATGAGATAGCTTTGGAAGAAAATGGGGACTACACCAGGGAGATTGGGTACTTAAAGTTTGCAAATTATACAGTAAATGTGAGCAGCAGCAGTTCCTATGACAACCTGTTGAACAATGTTTGGTATCAACCAGAGGAAGTGTTCCCTGTGGATGGAACTCCTGAGGAAAGGGAACATGCCTTTTGGGTTCCTGTTGACTCCCTCTACTTTCAGCTTTCCCAAAACCTATTGGCTTTGGAGCTGGAGGGGTGTGTGAACTCAACCACATGTTTGACTGAGACACCAAAGGTGGTGAGTGTATTAAGAGGAACAAGCGCAAGCATTTATCTAGACAATGCGGCTTACCGTGCCTTCATATACGATAAATTCCAGGTAAGCCCTGTGGACATGGAAAGCGCAGCGGTTGCACTCATCTGTCTGCAGCAGAGAGTAGCCTTCATCGCCTTCCGGGCTCTTTCCGACTTGGCCGGAGGTGGGTCTGCCCAGTCAAATGAGGCTGCTACCTTTACTTCTCTTGCCGCTAACAATTCCGTCACTGTTGTGGTTGAATTCATTAAGCAACTGTCCGCAGCCAGCTTCCACGCCAGCTTTGTTTCTTAA 1068 0.4551 MRNYEVVVMLLCAAMIMHAQEGNGALIREETQEMIDEANRNGPYLGLVIPNLFEMNPLLQSPNYTASNLTIDFAGRRFRFGTIADKKVILVMTGLSMINAGITTQLLLSTFDIEGVVHYGIAGNANPSLNIGDVTIPQYWAHTALWNWQRYGDGPEDEIALEENGDYTREIGYLKFANYTVNVSSSSSYDNLLNNVWYQPEEVFPVDGTPEEREHAFWVPVDSLYFQLSQNLLALELEGCVNSTTCLTETPKVVSVLRGTSASIYLDNAAYRAFIYDKFQVSPVDMESAAVALICLQQRVAFIAFRALSDLAGGGSAQSNEAATFTSLAANNSVTVVVEFIKQLSAASFHASFVS* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0345 355 Gene3D Nucleoside phosphorylase domain 48 344 IPR035994 GO:0003824|GO:0009116
Vvi4g0345 355 Pfam Phosphorylase superfamily 45 342 IPR000845 GO:0003824|GO:0009116
Vvi4g0345 355 SUPERFAMILY Purine and uridine phosphorylases 46 344 IPR035994 GO:0003824|GO:0009116
Vvi4g0345 355 PANTHER PURINE NUCLEOSIDE PHOSPHORYLASE 7 347 - -
Vvi4g0345 355 CDD MTAN 54 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0345 Vvi-Chr4 2936173 2937683 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0345 - - vvi:100242385 689.878