Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0344 ATGGAGCAGATTGGGGCGGAAGATACGATGGGGTTGTCTTCAAATCCAAAGAACCCGCTCCATCAACCTTCAAAGTCAAGACTTGGTGGTTTTAGAACCATGCCCTTCATTATAGTGAATGAGGTTTTTGAGAGAATTTCAAGCTTGGGTCTGATGCCCAACATGATATTATACTTGATGAGGGGATATAACATGAAAGCTGTAGATGGGTCTAACGTTTTGTTCATTTGGTCTGCTGTTACCCATGCGTTGGCCATTTTTGGAGCTTTTCTCTCTGATGCTTACTTGGGTCGGTTCAGGGTCATCGCTCTCGGGTCTTTCTCTAGCCTTACTGGGATGATTTTACTCTGGTTCACAGCGGTGATTCCAGGGATGAAACCTCAGCCATGTGAACAATTTAAAGATGATTGCAACCCTGCAACACCAGCCCAACTTGCAGTACTGTTCTCTTCTTTTGGGCTAATTTCAATTGGGGCTGGTTGCATCAGACCTTGTTCAATGGCCTTTGGTGCAGACCAATTGGATAAAGAAAACCCCGATAGCGAGAGGATCTTGGACAGCTTCTTCAATTGGTACTATGCTTCTTCTGCAATGTCAACAGTGATTTCTTTAACAATTATCGTGTACATTCAAGATCACTTGGGGTGGAATTTCGGGTTTGGAGTTCCTGCAATTCTCATGTTCTTCTCTGCCCTCATGTTCTTATTTGGTTCTTCGCTTTATGTCAAAGAGAAGCCGAGCTCGAGCTTGTTTACTGGATTTGTTCAAGTTCCTTTTGTGGCATTCAAGAATAGACACCTCAATCCTCCTTGTGATTCTGATGAATATTACCATCATAGTCATGACAAGAAGCTCACTCCAACCAATCAATTAAGGTGGCTAAACAGAGCTTGCATGATCAGAGATCCTGGGAGAGACTTGAGCTCAGATGGGTCAGATCCAAATTCATGGAGTATCTGCTCAGTGGAACAAGTGGAGTCCCTCAAAACCCTTCTAAGACTCATCCCCATATGGTCCACAGGCATCATGATCCTAGTGAGCATGGGCCAGACTTCATTTACCACACTCCAAGCAAACACCATGGACCGGTACCTCACCCCAAATTTTAAAATCCCAGCAGCATCCTTTGCTGTGTCCACAGTCGTCGTTCTCACGATATGGATTCCCATCTATGACATTGTACTTGTTCCCATACTAGCAAGATACACTGGCTGCCCTCGTGGTCTCAGCATGAAATTCAGAATGGGAATCGGGTTGGTACTTTCTTGCGTGGCCATGGCTGTGGGAGCAATAACAGAAAGCGTGAGACGGAGAATCGCCAATGAACAAGGCCTGGATGAGCAACCAGCTGCCACATTGAACATGTCTGCAATGTGGCTTCTGCCGCAGTTCATCCTGTTTGGATTCGCCGAGGCTTTTAGTGCAATTGGGCAGATTGAGTTTTATTATTCCCAGTTCTCCAAGAGCATGTCAAGCATTGCAGTGGCTCTCTTCACTGTTGGGATAGCTGGTTCCAACTTGGTGGGAAGTCTTCTGGTGAATGTTGTGAATAGTGTCACAAGCAAAGGTGGTAAGGAAAGCTGGTTGTCAAGCAACCTTAATAAAGGTCACTTGGATTATTATTACTGGCTGATTACCATCTTGTGTTTGATTAACATCATTTATTTTCTTGTTTGTTGTTGGTCTTATGGGCCTTTTGAGGATGAAAAACCTGGCATCTCTGATGAGGGAGAAGCTAATATTGACAAGCTCCAAATTCTTACTGTGATGGAGCAGATAATAGCAGAAGACCAGATGGGGTTCGCTCCAAATCCTAACAGGTCACGCTATCCACCTCCAAAGCCAAGATATGGTGGTTTCAGAACAATGCCCTTCATTATAGTGAATCAGTCTTTGGAGAAAGTTGCAGGGTTTGGTATAATGCCCAACATGATATTTTATCTCATGAATGGGTATCATATGGAAGCTGCAACTGGGTCAACCATTTTGTTCACTTGGTCTGCTTTTTCCAAATCCTTGGCCGTTTTTGGAGCTCTTCTCTCTGATTTTTACCTGGGTCGGTTTAGGGTCATCGCCTTTGGGTCCTTCTCTAGCCTTCTTGGGATCACACTACTCTGGTTAACTGCCATGATTCCATGGTTGAAACCTCCCCCATGTGACCAATTGAATGATAATTGCAACTCTGCAACACCAGCCCAACTTGCTGTCTTATTCACTTCTCTTGGGCTAATCTCAGTTGGAGCTGGCTGCATCAGACCTTGTTCGATAGCCTTTGGTGCAGACCAATTAGACAATAAAGAAAACCCCGATAATGACACAGTCTTGCAAAGCTTCTTCAATTGGTATTATGCTTCCATTGGAGTATCAACAGTGATAGCTTTAACATTTATAGCATACATTCAAGATCACTTGGGATGGAAATTCGGGTTTGGAGTTCCTGTAATTCTCATGGTCTTCTCTGCTCTCATGTTTGTCCTTGGCTCGTCTCTTTACATCAGAGTGAAGCCTGGCAAGAACTTGCTTACTGGATTTGTTCAAGTTTTAGTGGTGGCGTTTAAGAACAGATGCCTAACTCTTCCAACTGATTCTGTTGGATATTACAATCACAGCAGTGATCCCAAATTCCTTGCTCCAACTAGTGAGTTAAGGTGCCTGAACAAAGCTTGCATAATCAGGGATCCCAACAGAGACTTAAACTCAGATGGGTCGACTTCAAATCCATGGAGTCTTTGTTCAGTGGAACTAGTAGAGTCAGTCAAATCTCTTCTTAGAGTCATTCCCCTATGGTCCACAGGTATCATGATCCTAATGAGCATGGAGCAGACTTCATTTTCCACTCTCCAAGCAAACACCATGGATAGACATATTACCCCAAATTTTGAAATCCCAGCAGGGACATTTTCAGTGTTCACAATCATCACTCTTACAATATGGTTACCAGTTTATGACTGCCTACTTGTTCCCATATTGGCAAGATACACTGGCCAGCTGCGCGGCCTCAGCCCCAAAGTTCGAATGGGAATAGGGTTGGTATTGTCTTGCATGGCCATGGCAGTGGCAGCAGCAACTGAAATGATAAGACGGAGAATTGCCACTAAACAAGGACTAGAAGACCAACCTGCTGCCACAGTGAACATGTCTGCACTGTGGCTACTTCCACAATATGTCCTTCTTGGACTGGCCGAAGCTTTTAATGGAATTGGGCAGAATGAGTTTTATTACTCTCAGTTTCCCAAGAGCATGTCAAGCCTGGCAGGGGCTCTTTTCACACTTGGACTGGCTCTATCTAGCTTTGCAGGAAGTCTCCTGGTGAATGTTGTGAATAGTGTCACAACCAAAGGAGGGAAGGAAAGCTGGTTGTCAAGCAACCTCAATAAAGGTCACTTGGATTATTATTATGGACTGATTGCTGTATTGGGTATGATTAACTTCATTTACTTTCTTGTTTGTTGTCGGTTATATGGACCTTGTGAGGATGAAAAGACTAAACTCTCTGGTGAGGTGGAAGTTGATCAATTTCTGTATAGTGCTTTGCCTTCATCTTGA 3546 0.4397 MEQIGAEDTMGLSSNPKNPLHQPSKSRLGGFRTMPFIIVNEVFERISSLGLMPNMILYLMRGYNMKAVDGSNVLFIWSAVTHALAIFGAFLSDAYLGRFRVIALGSFSSLTGMILLWFTAVIPGMKPQPCEQFKDDCNPATPAQLAVLFSSFGLISIGAGCIRPCSMAFGADQLDKENPDSERILDSFFNWYYASSAMSTVISLTIIVYIQDHLGWNFGFGVPAILMFFSALMFLFGSSLYVKEKPSSSLFTGFVQVPFVAFKNRHLNPPCDSDEYYHHSHDKKLTPTNQLRWLNRACMIRDPGRDLSSDGSDPNSWSICSVEQVESLKTLLRLIPIWSTGIMILVSMGQTSFTTLQANTMDRYLTPNFKIPAASFAVSTVVVLTIWIPIYDIVLVPILARYTGCPRGLSMKFRMGIGLVLSCVAMAVGAITESVRRRIANEQGLDEQPAATLNMSAMWLLPQFILFGFAEAFSAIGQIEFYYSQFSKSMSSIAVALFTVGIAGSNLVGSLLVNVVNSVTSKGGKESWLSSNLNKGHLDYYYWLITILCLINIIYFLVCCWSYGPFEDEKPGISDEGEANIDKLQILTVMEQIIAEDQMGFAPNPNRSRYPPPKPRYGGFRTMPFIIVNQSLEKVAGFGIMPNMIFYLMNGYHMEAATGSTILFTWSAFSKSLAVFGALLSDFYLGRFRVIAFGSFSSLLGITLLWLTAMIPWLKPPPCDQLNDNCNSATPAQLAVLFTSLGLISVGAGCIRPCSIAFGADQLDNKENPDNDTVLQSFFNWYYASIGVSTVIALTFIAYIQDHLGWKFGFGVPVILMVFSALMFVLGSSLYIRVKPGKNLLTGFVQVLVVAFKNRCLTLPTDSVGYYNHSSDPKFLAPTSELRCLNKACIIRDPNRDLNSDGSTSNPWSLCSVELVESVKSLLRVIPLWSTGIMILMSMEQTSFSTLQANTMDRHITPNFEIPAGTFSVFTIITLTIWLPVYDCLLVPILARYTGQLRGLSPKVRMGIGLVLSCMAMAVAAATEMIRRRIATKQGLEDQPAATVNMSALWLLPQYVLLGLAEAFNGIGQNEFYYSQFPKSMSSLAGALFTLGLALSSFAGSLLVNVVNSVTTKGGKESWLSSNLNKGHLDYYYGLIAVLGMINFIYFLVCCRLYGPCEDEKTKLSGEVEVDQFLYSALPSS* 1182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0344 1181 Gene3D MFS general substrate transporter like domains 602 1163 IPR036259 -
Vvi4g0344 1181 MobiDBLite consensus disorder prediction 1 26 - -
Vvi4g0344 1181 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 618 1154 - -
Vvi4g0344 1181 CDD MFS_NPF1_2 623 1154 - -
Vvi4g0344 1181 CDD MFS_NPF1_2 34 563 - -
Vvi4g0344 1181 MobiDBLite consensus disorder prediction 8 22 - -
Vvi4g0344 1181 Pfam POT family 99 529 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vvi4g0344 1181 Pfam POT family 688 1120 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vvi4g0344 1181 Gene3D MFS general substrate transporter like domains 11 570 IPR036259 -
Vvi4g0344 1181 SUPERFAMILY MFS general substrate transporter 15 560 IPR036259 -
Vvi4g0344 1181 SUPERFAMILY MFS general substrate transporter 605 1152 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0344 Vvi-Chr4 2926996 2934108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0344 25 578 Organic Solute Cotransporters AT1G52190 50.000 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0344 K14638 - vvi:100250921 1156.35