Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0331 ATGGCATCTACATGTTTTGCTTTACAAGTAAATGGGTCTGCCGATAAGCTCTCAATCTCTCACAACTTTGGACACCTCAAAACCTCACTCTCTGATACTGTGAAGAAGCCTGTTTTGAAAGAGTCGCAGAAAATGTCATTGAGAGTGGATATTTTCAAAACCATCAGAAACACTTCCCGGAGAATGTTGGATGCATTTGTGGATTCTGTATTTCAATTCATTGATCAACAGTTATTCCCATCTCAGAAAAACTTTGCCCCGGTTGACGAAATTGGAGAAGCTGTCCAGGTTGTTTGTTCTGAGGGGAGATTTCCAGTGGGTATTTACATAAGAAACGTAAGAAACTCAGCAACACAAGCATTTTTGAGCATTCGGGGAGGTACTACGCTGTCTCAGAGAACCACCAGCCTCAAGAGATTGACATATTCACTCTGGAGACCTTGGAGGAGTGGGATCTCAACCGAGATTGGAACCGGCCTTTCACTAGCCATCCAAAGATTGATCAAGTATGATAAGGGAGACTCTGCAAGGATTGGAGTGATGGCTCGTTATGGTGATGCCGATTCAGTCCGGTGGTTCAGTGTAGAATCTCATTGTACATTCCACATTGTCAATAGCTTTGAGGACGGTGATGAGGCAATCCAAAAAACCATAGCTATACCATTGATATTTATCCAACCTTTTCTTGTTGGCCTCTTAAGTTTGAATTTGATTTTTTTACTTATAAACCAAGAACAGGTTGTAATAAGGGGGTGCAGGGCTCTCGACTCCATCATACCAGGTCCTAATCAAGGTCTAAATAAACCCAATGAAAATTCAATTAGTTTGGCAAAAGATGAGGACCTTTTTACTCGGGTATATGAATGGAGATTAAACATGGAGACAGGAGAGGTTAAGGAGAAAAATCTCACTGGGATGGATTTCTGCATGGACTTTCCTCTGATAAATGGAGAGATTATACTGGCGTTAAGCACAAGCCTGCCTAAATGTGGAGGTATAGCAAAAATATTCTTTGAAGAACAAGACTCGATGCTCCCTAAGAATGGACAAAGGATGAAGGTGAAGTGTCATAGCTTTGGGGAAAACAGCTTCTGCACTGGAAGTGCTTTTGCCTCGAAAGTTGGATCATGCGTTGAGGATGATGGTTGGATTGTCTCTTTTGTTCACATTGAAAACACTGATGTATCTCAATATTTTATGCGTGTTTTTGGATCTACTCGGCTTTTGTCTTCCTCTGAAGTCTTAACAGGAGTGTACTCGGACCATTTTCCAACTTGGGGCAGTGCTTGGATCCGCTAA 1299 0.418 MASTCFALQVNGSADKLSISHNFGHLKTSLSDTVKKPVLKESQKMSLRVDIFKTIRNTSRRMLDAFVDSVFQFIDQQLFPSQKNFAPVDEIGEAVQVVCSEGRFPVGIYIRNVRNSATQAFLSIRGGTTLSQRTTSLKRLTYSLWRPWRSGISTEIGTGLSLAIQRLIKYDKGDSARIGVMARYGDADSVRWFSVESHCTFHIVNSFEDGDEAIQKTIAIPLIFIQPFLVGLLSLNLIFLLINQEQVVIRGCRALDSIIPGPNQGLNKPNENSISLAKDEDLFTRVYEWRLNMETGEVKEKNLTGMDFCMDFPLINGEIILALSTSLPKCGGIAKIFFEEQDSMLPKNGQRMKVKCHSFGENSFCTGSAFASKVGSCVEDDGWIVSFVHIENTDVSQYFMRVFGSTRLLSSSEVLTGVYSDHFPTWGSAWIR* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0331 432 PANTHER BETA-CAROTENE DIOXYGENASE 164 396 IPR004294 GO:0016702
Vvi4g0331 432 Pfam Retinal pigment epithelial membrane protein 164 397 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0331 Vvi-Chr4 2863132 2867051 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0331 - - vvi:100242297 229.95