Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0329 ATGGGTCACAAGTTTCGATATTTATGGCAGGTTGAAGCCAGGCACCTGCTTTGGCTAATAGGGACGGTGTTTTCTGTGGTTTTTGTAGTTCAGTATTTTGAACTTCCTTATGGAGATGTTTTATCGTCTCTATTTTCTGCTGGCGATATACCAGCACCTGGAAAAACCAGCTTACCAAGCAGTGATTCATTGTCAAAACTTGGGACAATGGGCAACATGACAACAGCTCAGGGTTTAAACTCTTCTGATGTACATGCAATGCATGGAATAGATAGCAATGCCGAGACCATGGAAGGAAATAATGAAGGCCCAAAGAATGATTTTGCATCTGTGATGAATGGGGCCCTGGATAAATCTTTTGGATTAGATGAGGATAATAAAAATGTGACAGTGGAGAAAGTCAACAATTCAGGGAATAGGTCTGCACTAAAGAATGCTAGCAAGCATGAATCCAGCTTATACCTAGAAAATATTACTGCAGATAGTAATTCTTCATTAGGCAAAATCCAGGAAGATGATATGGCATTGCTATCACAGAGAAGTGAAAGATCAGGTGTTGGTTTAATATCCCCTTTGCCAGCATTACCACAGATAATTTCATCATCAAACACAACCTCTCTAACAAATTTGGATCCACATCCAATCACTCTTCCCCCAGAGAGATCTTCAGTGGAGGAAGATGCAGCACATACTCTTAACAAGGACGAAAAAGCAGAGACATCACAGAAGGATCTTACCTTGTCAAACCGTAGTTCCATCAGTGTTCCTGCATTGGAGACAAGACCTGAGTTACCAGCAGTAACAACAATATCTGAGATGAATGATTTGTTAGTTCAGAGTCGTGCTTCATCCCGCTCAATGAAACCCCGTTGGTCTTCAGCAGTTGACAAAGAGCTACTATATGCAAAATCACAGATAGAAAATGCACCCATAATAAAGAATGATCCAGGGCTTCATGCTTCTCTTTATCGAAATGTTTCAGTGTTTAAAAGGAGCTACGAGTTAATGGAAAACACACTCAAGGTATACACTTACAGGGAAGGGGAAAGACCTGTATTTCATCAGCCACCAATCAAGGGGATTTATGCTTCTGAGGGATGGTTCATGAAACTGATGCAAGCAAATAAAAAGTTTGTCACTAAAAATGGAAGAAAAGCCCACCTGTTTTACTTACCTTTCAGTTCCCTAATGTTAGAGGAAGCCTTATATGTTCCCAATTCACACAGTCGGAAAAACCTAGAACAGTATTTGAAGAACTATTTGGACATGATTGGGGCAAAATATCCATTCTGGAACAGAACTGGGGGAGCAGATCATTTTCTCGTTGCTTGCCATGACTGGGCTCCATCTGAAACACTGAAGCTCATGGCTAACAGCATCAGAGCTCTATGCAATTCTGATATCAGAGAAGGCTTCAAACTAGGGAAAGATGTGTCTCTTCCAGAAACATGCGTCCGCATACCTCAGAACCCCCTTAGACAACTTGGAGGGAAACCTCCTTCACAGAGGCGAATCCTTGCATTCTTTGCAGGGAGCATGCACGGTTATGTACGGCCAATCCTGTTGAAGTACTGGGAAAACAAAGATCCTGACATGAAAATCTATGGCAGAATGCCTAAGGCTAAGAAGGGGACAATGAACTACATCCAGCACATGAAGAGCAGCAAGTACTGTATCTGTGCAAAAGGTTATGAAGTGAACAGCCCAAGAGTGGTGGAAGCCATTTTCTATGAATGTGTCCCGGTCATCATCTCCGACAACTTTGTTCCTCCATTCTTCGGGGTTTTGAACTGGGAATCCTTTGCCGTCTTCATCCTGGAGAAGGACATTCCAAATTTGAAGAGCATACTGCTTTCAATCCCAGAGAAAAGTTACCTGGAAATACAGATGAGGGTTAAACAGGTACAGCAACATTTTCTGTGGCATGCTAAGCCTGTGAAGTATGATGTGTTTCATATGATTCTGCACTCTGTTTGGTACAACAGAGTTCTCCAAATAAGGGTAAGACCCAAACAATTACTTGGTTAG 2028 0.4191 MGHKFRYLWQVEARHLLWLIGTVFSVVFVVQYFELPYGDVLSSLFSAGDIPAPGKTSLPSSDSLSKLGTMGNMTTAQGLNSSDVHAMHGIDSNAETMEGNNEGPKNDFASVMNGALDKSFGLDEDNKNVTVEKVNNSGNRSALKNASKHESSLYLENITADSNSSLGKIQEDDMALLSQRSERSGVGLISPLPALPQIISSSNTTSLTNLDPHPITLPPERSSVEEDAAHTLNKDEKAETSQKDLTLSNRSSISVPALETRPELPAVTTISEMNDLLVQSRASSRSMKPRWSSAVDKELLYAKSQIENAPIIKNDPGLHASLYRNVSVFKRSYELMENTLKVYTYREGERPVFHQPPIKGIYASEGWFMKLMQANKKFVTKNGRKAHLFYLPFSSLMLEEALYVPNSHSRKNLEQYLKNYLDMIGAKYPFWNRTGGADHFLVACHDWAPSETLKLMANSIRALCNSDIREGFKLGKDVSLPETCVRIPQNPLRQLGGKPPSQRRILAFFAGSMHGYVRPILLKYWENKDPDMKIYGRMPKAKKGTMNYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFGVLNWESFAVFILEKDIPNLKSILLSIPEKSYLEIQMRVKQVQQHFLWHAKPVKYDVFHMILHSVWYNRVLQIRVRPKQLLG* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0329 675 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 214 658 IPR004263 GO:0006486|GO:0016757
Vvi4g0329 675 Pfam Exostosin family 337 618 IPR040911 -
Vvi4g0329 675 MobiDBLite consensus disorder prediction 203 248 - -
Vvi4g0329 675 MobiDBLite consensus disorder prediction 223 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0329 Vvi-Chr4 2838294 2841214 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0329 - - vvi:100267950 1355.12