Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0324 ATGGCTTCTACACAATTTTCTTCTCCCAGAAGCCATGCTCAACAGGCAACCATGGCGGTTTCCGGTAAGCCTGGTAGTGTGAAAGGTGGGTGTTCATTTGGGAGGGCTGTTAATTTCTCTAGAAAACATCACAAGGGTGGATTAAGAGTGAGAAATGTTGCGACTAGATTGCCGGAGACTCAGGTGTCGCCGGAGACTCAGGTATCGCCTGAGAAAGGGGGTGGGAATGAGAGGAAGCTTGCTGCATGGACGAGCATCCGGCAAGAGAGATGGGAGGGAGAGCTGGCTGTTCAGGGAGAAATACCACTATGGCTGAATGGGACATACCTAAGGAACGGTCCAGGCCTGTGGCACATAGGAGATTACAACTTCCGCCACCTCTTCGACGGCTACGCCACACTTGTCCGCCTACACTTCCAGGACGGCCGATTAATAGCTGGCCACCGACAGATTCAATCCGAAGCATATAAGGCAGCGATCAAGAATAAAAAACTATGTTACCGTGAATTCTCGGAGGTCCCAAAGGCTGACAACTTCCTATCTTATGTGGGTGAGCTGGCTAGCTTATTCTCTGGTGCTTCGCTGACAGATAACGCTAACACCGGCGTTGTTAGACTCGGCGATGGAAGGGTGGTGTGCCTGACGGAGACGATAAAAGGGTCAATAATCATCGATCCTGACACACTCGAGACGATGGGGAAATTTGAGTACAGTGACACATTGGGAGGGTTGATACATTCGGCACATCCAATCGTGACAGAATCGGAGTTCTGGACGTTGTTGCCGGACTTGGTGAAGCCGGGGTACATAGTGGTGAGGATGGAGCCAGGGAGCAATGAGAGGAAGGTGATAGGGAGGGTGAATTGCAGGGGTGGTCCTGCACCAGGGTGGGTTCATTCATTTCCGGTGACCGAACACTACGTGGTTGTCCCGGAAATGTCATTAAGGTACTGCGCCCAAAATCTTCTAAGGGCCGAGCCCACGCCACTTTACAAGTTCGAGTGGCACCCTCTGTCCAAAGCCTTTATGCACGTTATGTGTAAAGCTAGTGGCAAAATTGTGGCAAGTGTGGAAGTTCCATTGTACGTGACGTTCCATTTCATCAATGCATACGAAGAAAAAGACGAGGACGGGAGGGTGACAGGCATCGTAGCTGATTGTTGTGAGCACAACGCCGATACCACTATTCTAGATAAGCTCAGGCTTCACAATCTCCGGTCGTTTTCTGGGGAAGACGTGCTGCCTGACGCTAGGGTTGGGCGTTTCACAATACCGTTGGATGGGAGTCCATATGGGAAGTTAGAGGCAGCATTGAACCCAGATGAACATGGGAGAGGCATGGATATGTGCAGTATCAACCCTGCCTACTTGGGCAAGACGTACAGATATGCCTATGCTTGTGGGGCACAGCGCCCTTGTAACTTCCCCAACACCCTCACTAAGCTTGATTTAGTGGAGAAGAAGGCAAAGAACTGGTTCGATGAAGGTTCTGTGCCCTCGGAACCATTATTTGTGGCTCGTCCAGGGGCAACAGAGGAGGATGATGGTGTTGTGATCTCGATGGTCAGTGACAAAAATGGGGAAGGATATGCACTGTTGTTGGACGGGAGAACTTTTGAAGAGATCGCAAGGGGGAAGTTCCCGTACGGACTTCCATATGGGCTGCATGGCTGCTGGGTTCCCAAGAAATAG 1692 0.5089 MASTQFSSPRSHAQQATMAVSGKPGSVKGGCSFGRAVNFSRKHHKGGLRVRNVATRLPETQVSPETQVSPEKGGGNERKLAAWTSIRQERWEGELAVQGEIPLWLNGTYLRNGPGLWHIGDYNFRHLFDGYATLVRLHFQDGRLIAGHRQIQSEAYKAAIKNKKLCYREFSEVPKADNFLSYVGELASLFSGASLTDNANTGVVRLGDGRVVCLTETIKGSIIIDPDTLETMGKFEYSDTLGGLIHSAHPIVTESEFWTLLPDLVKPGYIVVRMEPGSNERKVIGRVNCRGGPAPGWVHSFPVTEHYVVVPEMSLRYCAQNLLRAEPTPLYKFEWHPLSKAFMHVMCKASGKIVASVEVPLYVTFHFINAYEEKDEDGRVTGIVADCCEHNADTTILDKLRLHNLRSFSGEDVLPDARVGRFTIPLDGSPYGKLEAALNPDEHGRGMDMCSINPAYLGKTYRYAYACGAQRPCNFPNTLTKLDLVEKKAKNWFDEGSVPSEPLFVARPGATEEDDGVVISMVSDKNGEGYALLLDGRTFEEIARGKFPYGLPYGLHGCWVPKK* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0324 563 MobiDBLite consensus disorder prediction 1 21 - -
Vvi4g0324 563 MobiDBLite consensus disorder prediction 56 78 - -
Vvi4g0324 563 MobiDBLite consensus disorder prediction 56 70 - -
Vvi4g0324 563 MobiDBLite consensus disorder prediction 1 27 - -
Vvi4g0324 563 Pfam Retinal pigment epithelial membrane protein 86 561 IPR004294 GO:0016702
Vvi4g0324 563 PANTHER BETA-CAROTENE DIOXYGENASE 80 561 IPR004294 GO:0016702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0324 K17913 - vvi:100250765 1167.53