Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0323 ATGGGTTCATATTCCTCAATAAGAGCATTTGGCGCACTTCTTCATAGATTCTCAAATGGGGTTCCCTTCAAACACTCCAATTCCGTTGCTCTTCGGACTGGTTTTCTGCCCAAGAACCCATCATCATTTTCATCAAAGTCGTCGTGGCTATCGTTGTACGAGGTTAAGCTTAGTGTTCGAGTGAGAACGATACAGACATTCTCTCCTGTTTGTATGGGTAGGCGTTCAAGCAAGATTGCTGGCAGAAAGGGAGCTCAGGATGCAAAAAAGGCTAAGCTGTATTCAAAAATTGGGAAGGAAGTTGTATCTGCTGTAAAGAGAGATGGTCCAAATCCAAAATCAAATACAATTTTAGCAGCTGTACTTGAGAAAGCTAAGGAACTTGATGTACCCAAGGAAATTGTGGAGCGCAATATTAAGAGAGCTTCTGAGAAGGGGCAAGAGGCTTATATTGAGAAATTCTATGAGGTATATGGTTTTGGTGGAGTTAGTATGATAATTGAGGTCTTAACGGATAAAATAAACCGATCTGTGGCAGCTGTTAGAGAGGTTATGAAGGACTGTGGTGGAAAGATGGCAGATCCAGGATCTGTTATGTTCAAGTTTAGACGTGCTCGGGTTGTAAATGTAAAAGCCTCAGAGGCTGACAAAGACCAGCTCCTTACCATTGCTTTAGATACTGGTGCCGAGGATGTCATTGAACCGCCAGTCTACGAAGATGATGCTGAAGAAGATAGATCAGAAAGCTATTATAAAATTGTAACCTCAGCAGAAAACTATTCAGCCATTCTGGAAAAGCTTCGCGAGGAAGGAATAAATTTTGAAACTGATAATGGATTTGAGATGCTTCCAATAACCACCATTGAGGTAGATGATGAAGCAATGGACTTGAACAAGGAACTCATGTCCAAATTGCTTGAACTTGATGATGTTGATGCTGTCTATATGGACCAGAAATGA 960 0.4125 MGSYSSIRAFGALLHRFSNGVPFKHSNSVALRTGFLPKNPSSFSSKSSWLSLYEVKLSVRVRTIQTFSPVCMGRRSSKIAGRKGAQDAKKAKLYSKIGKEVVSAVKRDGPNPKSNTILAAVLEKAKELDVPKEIVERNIKRASEKGQEAYIEKFYEVYGFGGVSMIIEVLTDKINRSVAAVREVMKDCGGKMADPGSVMFKFRRARVVNVKASEADKDQLLTIALDTGAEDVIEPPVYEDDAEEDRSESYYKIVTSAENYSAILEKLREEGINFETDNGFEMLPITTIEVDDEAMDLNKELMSKLLELDDVDAVYMDQK* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0323 319 FunFam Putative transcriptional regulatory protein 75 149 - -
Vvi4g0323 319 Pfam Transcriptional regulator 76 316 IPR002876 -
Vvi4g0323 319 FunFam Putative transcriptional regulatory protein 201 286 - -
Vvi4g0323 319 Gene3D - 74 149 IPR017856 -
Vvi4g0323 319 PANTHER UNCHARACTERIZED 52 319 IPR002876 -
Vvi4g0323 319 SUPERFAMILY YebC-like 76 318 IPR029072 -
Vvi4g0323 319 Gene3D - 201 286 IPR026564 -
Vvi4g0323 319 Hamap Probable transcriptional regulatory protein YebC [yebC]. 72 318 IPR002876 -
Vvi4g0323 319 Gene3D - 154 316 IPR026564 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0323 - - vvi:100245721 612.838