Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0321 ATGGCTCACCTCTTCAGGGACCTCTCGCTTGGCCACTCCAAGAGAGGTACAACCGCCACCGTGGCAGCCACCGCCGTCACGGCAACCGCAATGCCGGTTGCCGATCTGCCTTCTCCATTCGGTCAACTCACTCCAACACTTACCGATTCCGATCTCCGACTCACCGCCTACGAGATCTTCGTTTCCGCATGCCGTACCTCTTCCGGAAAGCCTCTCTCCTCCATTTCCCAAGCCGACCGCTCTTCGTCGTCGTCGTCGCCGACCCCGACGCCGCCAATATCGCCCTCTCTTCAGCGCTCGCTGACGTCAACCGCGGCCAGCAGGGTAAAGAAGGCATTCGGCTTGAAATATTCGCCGTCCTCTAAGAAGAGTCCCTCCGGCAAGGATACGAGCCCGGCGAAGGCTGCGAAGAAGCCCATGACGGTGGGCGAGCTCATGAGGTTTCAGATGAGGGTTTCTGAGGACACCGATTCCAGGATTCGGAGGGCTCTGTTAAGAATTGCTGCTTCTCAGGTTGGAAGGCGAATTGAATCTATGGTTCTCCCACTAGAGCTACTACAACAGTTCAAATCTTCAGATTTTACTGATCAGCAAGAATATGAAGCTTGGCAAAAGAGAAATCTGAAAATTCTTGAGGCTGGCCTCCTCTTACATCCCCGTTTGCCCTTAGATAAATCAAACACTGCTCCCCAACGGTTGCGGCAGATTATTCATGGAGCACTGGATAGGCCTATGGAAACTGGCAGAAACAATGAATCTATGCAACTACTTCGTAATGCTGTAGTGTCTCTTGCTTGCAGATCATTTGATGGATCCGAGGCTTGCCACTGGGCAGATGGGTTTCCACTAAATCTTCGACTCTATGAAATGCTCCTAGAAGCTTGCTTTGATGTTAATGAAGAAACATCTATTATCGAGGAAGTTGATGAACTTATGGAACAGATAAAGAAGACCTGGGGAATTCTTGGAATGAACCAAATGCTCCATAACATTTGCTTCACGTGGGTATTATTTCACCGTTTTGTCACAACTGGCCAAGTTGAAAATTATCTGCTGGATGCTGCCGATAATCAGCTTGCAGAAGTAGCAAAAGATGCGAAAACAACTAAGGATCCAGAGTACCCCAAGATCTTGAGTTCTATGTTGAGTTCAATATTAGGTTGGGCTGAGAAAAGGCTTCTTGCATACCATGACACTTTTGATAGTGCAAATATTGATTCCATGCAAAATATTGTTTCTTTGGGGGTATCAGCAGCCAAGATTTTGGTTGAAGATATATCTCATGAGTACCGTAGAAGGAGAAAAAGTGAAGTTGATGTGGCTCGGAACAGGATAGACACTTACATCAGGTCATCGCTACGTACTGCTTTTGCCCAGGCAAGTCCTTACTATCTCTACTGCAATGGTGCAGGGGAACATGATTGCCAGCTGACTAATGTGATGTTAGTAATAATGGAGAAGGCAGATTCTAGCAGGAGGGCATCCAAAAACCGGCCAAATTCTCTTCCTGTCCTCGCCATTCTTGCCAAGGACGTTGGTGAGCTTGCAGTCAATGAGAAGGTTGTCTTCAGTCCAATTCTGAAGAGGTGGCACCCTTTTTCAGCAGGAGTGGCTGTAGCTACCCTGCATGCTTGCTATGGGAATGAGCTAAAGCAATTTATCTCGGGTATCACGGAATTGACACCAGATGCTGTACAAGTTTTGAGAGCTGCAGATAAGTTGGAGAAAGATCTTGTGCAGATTGCTGTTGAAGATTCAGTGGACAGTGAAGATGGTGGGAAGGCAATAATCCGTGAGATGCCCCCTTTTGAAGCTGAAGCTGCAATAGCCAATCTAGTGAAAGCATGGGTTAAGACAAGGGTTGACCGGCTCAAAGAATGGGTTGACAGGAATTTACAGGAAGAGGTCTGGAATCCTCAAGCAAATGAAGAAGGCTATGCTTCCTCTGCTGTTGAACTCATGCGAATCATAGATGAAACTTTGAATGCTTTCTTTCAGCTTCCAATACCAATGCACCCAGCATTGCTTCCTGACTTGATGGCTGGTTTTGACAGATGTCTTCAGTATTACATTACAAAGGCAAAATCTGGCTGTGGATCACGGAATACATTTGTTCCCACAATGCCAGCATTAACCAGATGCACAACAGGATCAAAGTTCCAAGGTGTGTGGAAGAAAAAGGAAAAGTCACCACACTCCCAGAAAAGGAATTCTCAGGTTGCCGTAGTGAATGGAGATAACTCCTTTGGGATACCACAGCTATGTGTTCGCATAAATACCATGCAACGTCTTCGGATGGAGTTGGAAGTTTTGGAGAAGAGGGTAATTACTCATCTGAGAAACTGTGAATCAGCTCATGCAGAAGACTTGTCCAATGGTTTGGGGAAGAAGTTTGAACTTGCACCAGCTGCTTGTCTAGAGGGTATCCAACAACTCTCTGAGGCATTGGCATACAAAATCATCTTCCATGATCTTAGTCATGTTCTATGGGATGGTTTGTATGTTGGTGAGCCATCATCTTCAAGGATTGAGCCTCTACTTCAGGAACTTGAGCAGAACTTGATGATTGTATCAGATAACATACATGAAAGAGTTCGGACACGGGCTATTACCGACATAATGAGAGCTTCCTTTGATGGGTTCTTGTTGGTTTTGCTTGCTGGAGGTCCATCTCGTGCATTTTCTCGTCAGGACTCCCAAATAATAGAGGATGATTTCAAATCCCTTAAAGATCTGTTCTGGTCCAATGGAGATGGTTTGCCAGCTGATTTGATAGACAAATTCTCAGGCACAGTGAGAGGTGTGCTCCCTCTGTTCCGAACTGACACAGAGAGCCTCATTCAGCGCTTCAGACAAGTGACTTTGGAGACATATGGTCCTTCTGCCCGATCCAGACTCCCATTACCTCCTACTTCAGGGCAATGGAACTCAACTGAACCGAACACACTCCTGCGTGTTTTATGTTACCGTAACGATGAAGCTGCTTCAAAGTTCCTTAAGAAAACCTATAACTTGCCTAAAAAACTGTAA 3030 0.4617 MAHLFRDLSLGHSKRGTTATVAATAVTATAMPVADLPSPFGQLTPTLTDSDLRLTAYEIFVSACRTSSGKPLSSISQADRSSSSSSPTPTPPISPSLQRSLTSTAASRVKKAFGLKYSPSSKKSPSGKDTSPAKAAKKPMTVGELMRFQMRVSEDTDSRIRRALLRIAASQVGRRIESMVLPLELLQQFKSSDFTDQQEYEAWQKRNLKILEAGLLLHPRLPLDKSNTAPQRLRQIIHGALDRPMETGRNNESMQLLRNAVVSLACRSFDGSEACHWADGFPLNLRLYEMLLEACFDVNEETSIIEEVDELMEQIKKTWGILGMNQMLHNICFTWVLFHRFVTTGQVENYLLDAADNQLAEVAKDAKTTKDPEYPKILSSMLSSILGWAEKRLLAYHDTFDSANIDSMQNIVSLGVSAAKILVEDISHEYRRRRKSEVDVARNRIDTYIRSSLRTAFAQASPYYLYCNGAGEHDCQLTNVMLVIMEKADSSRRASKNRPNSLPVLAILAKDVGELAVNEKVVFSPILKRWHPFSAGVAVATLHACYGNELKQFISGITELTPDAVQVLRAADKLEKDLVQIAVEDSVDSEDGGKAIIREMPPFEAEAAIANLVKAWVKTRVDRLKEWVDRNLQEEVWNPQANEEGYASSAVELMRIIDETLNAFFQLPIPMHPALLPDLMAGFDRCLQYYITKAKSGCGSRNTFVPTMPALTRCTTGSKFQGVWKKKEKSPHSQKRNSQVAVVNGDNSFGIPQLCVRINTMQRLRMELEVLEKRVITHLRNCESAHAEDLSNGLGKKFELAPAACLEGIQQLSEALAYKIIFHDLSHVLWDGLYVGEPSSSRIEPLLQELEQNLMIVSDNIHERVRTRAITDIMRASFDGFLLVLLAGGPSRAFSRQDSQIIEDDFKSLKDLFWSNGDGLPADLIDKFSGTVRGVLPLFRTDTESLIQRFRQVTLETYGPSARSRLPLPPTSGQWNSTEPNTLLRVLCYRNDEAASKFLKKTYNLPKKL* 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0321 1009 PANTHER PROTEIN UNC-13 HOMOLOG 25 1007 IPR008528 -
Vvi4g0321 1009 MobiDBLite consensus disorder prediction 116 141 - -
Vvi4g0321 1009 MobiDBLite consensus disorder prediction 67 87 - -
Vvi4g0321 1009 Coils Coil 761 781 - -
Vvi4g0321 1009 Gene3D - 603 800 - -
Vvi4g0321 1009 ProSiteProfiles Munc13-homology domain 1 (MHD1) profile. 565 708 IPR014770 -
Vvi4g0321 1009 MobiDBLite consensus disorder prediction 67 101 - -
Vvi4g0321 1009 ProSiteProfiles Munc13-homology domain 2 (MHD2) profile. 840 950 IPR014772 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0321 Vvi-Chr4 2766507 2771829 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0321 - - vvi:100250865 1871.67