Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0319 ATGCCCGGCCTGACTGCAGATTCTGGCAACGCTCTCGTCCCACTCTCGCCTGAAGCTCATGTATCCGTCGTTTATCCTCTCCACCACGGCCTCAAGCCCCCGATCTCTCGCCTCTCTATCTCTTGGTCCCGAGGCAACGCCCTTCGTGTGTCAGTTTTCCGGGAACTTCCGGCTGAGTCCAGTGACTCGGACGGAGAAGCTGGTGGGAAAGTGGTGCAAGTGAAGCTTGGAGTCGCAGATGGAGAGGTCGATGATGCGCAGTGGCGGAGGATTGCCTACGGTTCCGTTTCGCCGTTTGCGCTTCTCCAGAGTCGGAGGAATTCAGTTTTGGCGTTGTCTAAAATGTCGATGAGTTCGTCTCCTTATCACCCTGACTGGTGGGAGTATGTGATGGAGTACAGCAAAGACATAAGTTCTCTTCTGGATAATGCAAAGTCACTTCCTAATTCGATGATTGATGACCCCAAGACAGTTTTAAAGAAAGTTGAGGAGCCTACATGTTTGAAGGCTGCATGGGGGCTGTTGGAGATATTCTATGCAGACAAGGAATCTCAAGCATGGCTTCCTGAACGGATTGTTGATTGGTTAGCTGATTATGATGTCCTCTTCTCAGGAACACAGGCAACTGTCCATTCAAAGCTTGTGGAATTTCAAAAAGAAATTGTCCGTTTACAGGTTATTGAGGATGATCCTAGATATTGGGAAGTAATAACATCGGCACTAGCAGTTGGCTGGTTAGAGATTGTTGTGAAATTGTTGCGCTTGCATGGCTCTTATCAATTGGATCAACTTAGCAATCGTGAGACTGAGAATGGGCTGGTAGAGGCAGTTGCCATTCTTATTTCAAAAATGCCACGCATGCGTCCTGAATTAGAAGCTGGGAGATTGGGTGAATGCTTTAAAACAAAGCCTGATTTCATCAAGGCATGGGAGAAATGGCGGGCACAAATAACTAAGCTGGACTGTAGTTCATTCTGGGTTCAGTGTGATCACCGTCAGACCAGGGAAGGCTTGAGAAATATGCTACAGCTCATGCTGGGAAACACTAACAATCTCTGCACTTCGACATGTCATTGGATAGAGCTATATATTTCTCACTTTCTTTATGTCAGGCCTTTCACAGTGGGTTTAGAAAGCATGCACGCCCTAGCACAGAAATGCATTCAGTTGAAACCAATTTCCAGTTCTCATAGGTTGATGGGGCTTATTGTTGGAATTCTTGGAGAAAATACTGAGGTCGTGTTAGCAGAATGCTCTAGAGCATTTGGCCCCTGGATGGTTGCTCATGCCATTGAGTTGTTGACTGCTGGGAGTGATCAAGCAGAAATTATCTTACAGGAAGGGCGTGATAACCTAGGGGGAATCAGTATAGAGGAGCTTCACCGACTCATCTATGCTCAAGTCTTGTCGTCTCATGCATTAACTTGGCAAATTGCTCCAATTTATTTGACCTCATGCATGAAGCAAGGAATGGGTCTGTTGGAAGTTTTATTGTACAAGCAACCTGTTCAAGATAATCAAATGCTCCTTAAGACTACAGAAATTTGCCGTCTGTATGATCTTGAAAGTATCAGTTCAAGCATTATGAAGATTGCTGGAGTGTATCACTGGAAGCATGGTAGGAAAGGTTCTGGAGTATTCTGGCTTCAACAAGCTCGGGATGAATTTCGTCTGAACAGAATTGCTCAGCAGTTGTTTGACTTTGTTGGAAGGTCAATCTCTGATGAAAGTTTTAAGCAATGGGAAGGATTAATTGAATTGCTGGGCTCTGAATCTAAGATCGCTGGGGGGCTCGATTTTCTGCACAAGTACAGGGATTTCAAAAAATCTCTTCAGCAGGTTCAAGTTGGAAAGACAACTGATGCTGCTCAGCAAGCTGTTGAATCCCTTATATCGCTTATGAGAAACCCTTCTACACCTCAACGCTTTTGGCTGCCTCTTCTGCACGACTCATTGAAGTTGCTTAGTTGGCAAGAGCGTCCCTTGCTGAATGCTAATCAAACCAACCTGTTGCTGAATAAACTGCAAGAGTTATCTATGGCAAGGCTGCGCCCAGACTTCATTGAAGCTAACTTGCCGCCACAGGCCTTAAGCTCTGTCAGGCTAGCTCTTGCCACAAATCTCGGCCGGGCTATCCTCGAGGAATGA 2148 0.459 MPGLTADSGNALVPLSPEAHVSVVYPLHHGLKPPISRLSISWSRGNALRVSVFRELPAESSDSDGEAGGKVVQVKLGVADGEVDDAQWRRIAYGSVSPFALLQSRRNSVLALSKMSMSSSPYHPDWWEYVMEYSKDISSLLDNAKSLPNSMIDDPKTVLKKVEEPTCLKAAWGLLEIFYADKESQAWLPERIVDWLADYDVLFSGTQATVHSKLVEFQKEIVRLQVIEDDPRYWEVITSALAVGWLEIVVKLLRLHGSYQLDQLSNRETENGLVEAVAILISKMPRMRPELEAGRLGECFKTKPDFIKAWEKWRAQITKLDCSSFWVQCDHRQTREGLRNMLQLMLGNTNNLCTSTCHWIELYISHFLYVRPFTVGLESMHALAQKCIQLKPISSSHRLMGLIVGILGENTEVVLAECSRAFGPWMVAHAIELLTAGSDQAEIILQEGRDNLGGISIEELHRLIYAQVLSSHALTWQIAPIYLTSCMKQGMGLLEVLLYKQPVQDNQMLLKTTEICRLYDLESISSSIMKIAGVYHWKHGRKGSGVFWLQQARDEFRLNRIAQQLFDFVGRSISDESFKQWEGLIELLGSESKIAGGLDFLHKYRDFKKSLQQVQVGKTTDAAQQAVESLISLMRNPSTPQRFWLPLLHDSLKLLSWQERPLLNANQTNLLLNKLQELSMARLRPDFIEANLPPQALSSVRLALATNLGRAILEE* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0319 715 PANTHER FROUNT PROTEIN-RELATED 21 715 IPR011502 -
Vvi4g0319 715 Pfam Nup85 Nucleoporin 81 677 IPR011502 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0319 K14304 - vvi:100256006 1411.74