Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi4g0315 | ATGTTGGGTTCGTTCCGAAACTCTTCCCAGCCAAACAAGCAGAAACAAGAAAGAGAATGGTTTGCAGTGAATTTCAAGCCAGAAAACTTCATACCAGGTCTCATCATCGGTTTCATTTTTGGGTTTTTCTTGGATTTATCAAAAGTCCCCAAGAATCAACCGAGGCATAATAATTCCTTACTGGGAAAGCGCCAGCAGCAGCAGCAACTAGTATCAAGTAACTCTGATGAAGAACTTAAAATGGTTTTGGTTGTTAGACAAGACCTGAAAATGGGAACAGGGAAGATTGCATCTCAATGTGCTCATGCAGCCACTGGCATGTATGCGGAACTGGTGCAAAGCCAGAGGTCACTTTTGAGACAATGGGAGCAATGCGGGCAAGCAAAAATAGTTGTCACATGCAAGAATCAACAAGAAATGAATAAACTAAAGGAAGCAGCTGAGAGTATTGGCCTTCCAACTTTCGTTGTTGCTGATGCAGGACGCACACAGGTTTTGTCTGGCTCAAAGACAGTTCTTGCCATCGGGCCTGGAAGAAAGGCATCGGTAGATTCAATAACTGGGAAACAGCGCCTACTGTGA | 582 | 0.4399 | MLGSFRNSSQPNKQKQEREWFAVNFKPENFIPGLIIGFIFGFFLDLSKVPKNQPRHNNSLLGKRQQQQQLVSSNSDEELKMVLVVRQDLKMGTGKIASQCAHAATGMYAELVQSQRSLLRQWEQCGQAKIVVTCKNQQEMNKLKEAAESIGLPTFVVADAGRTQVLSGSKTVLAIGPGRKASVDSITGKQRLL* | 194 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi4g0315 | 193 | Gene3D | Bit1 | 74 | 193 | IPR023476 | - | |
| Vvi4g0315 | 193 | SUPERFAMILY | Peptidyl-tRNA hydrolase II | 77 | 193 | IPR023476 | - | |
| Vvi4g0315 | 193 | CDD | PTH2 | 80 | 193 | IPR002833 | GO:0004045 | |
| Vvi4g0315 | 193 | FunFam | Peptidyl-tRNA hydrolase 2, mitochondrial | 77 | 193 | - | - | |
| Vvi4g0315 | 193 | NCBIfam | aminoacyl-tRNA hydrolase | 79 | 193 | IPR002833 | GO:0004045 | |
| Vvi4g0315 | 193 | PANTHER | PEPTIDYL-TRNA HYDROLASE 2 | 9 | 193 | IPR002833 | GO:0004045 | |
| Vvi4g0315 | 193 | Pfam | Peptidyl-tRNA hydrolase PTH2 | 79 | 193 | IPR002833 | GO:0004045 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vvi4g0315 | Vvi-Chr4 | 2743438 | 2746984 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi4g0315 | K04794 | - | vvi:100243888 | 367.851 |