Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0309 ATGAATGAGCAAAGGCTTAGAAAGGCGGTCTCCGATGTCTCGTCCGAAATAGGCAAGTATAGGAAGGAGTTGGAAGCCATTACAAAGATTGATGAAGTCAAGCAAGCAGAATGTGAATGCTGTGGACTCGTTGAGGATTGCACCCCGGATTACATTGTAGAAGTGAAAGATTCTTATTCCGACAAATGGGTATGCGGCCTTTGTTCAGAAGCTGTCAAAGAAAGGCTAATCCATGGGCCAAGAATCACCATGGAAGAAGCTGTGAGCTCCCACAAGGACTTTTGCCAGAAGTTCAATAATACTACTAGACTCAACCCTAAGCTCTCATTAACATGCACCATGAGGGATATAGTTAAAAAAAAATCTGAGAATAGAGATTCCAAGACATTGGTCACACCAAAGCTCGGTCGAACCATTAGCTGTGTCCCCAGGATCAATGCCAACATGAAATAA 453 0.4327 MNEQRLRKAVSDVSSEIGKYRKELEAITKIDEVKQAECECCGLVEDCTPDYIVEVKDSYSDKWVCGLCSEAVKERLIHGPRITMEEAVSSHKDFCQKFNNTTRLNPKLSLTCTMRDIVKKKSENRDSKTLVTPKLGRTISCVPRINANMK* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0309 150 PANTHER OS01G0745000 PROTEIN 25 147 IPR012876 -
Vvi4g0309 150 Pfam Protein of unknown function (DUF1677) 33 120 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0309 Vvi-Chr4 2673301 2673845 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0309 - - vvi:109122487 308.145