Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0308 ATGGTGTTAGGCTCAAGCTCCAGGAGCGATAATCCCAGAAACAAGCCTACAAGACTCTCCGTAGAAGGCCTACAGAGAACACTCTCCGACATCTCACTGGAACTAAGCAAAGAAGACATTGATAACGATATCAACCTCCCACCCATTTCCGAGGTGGAGAATGCCAAGTGCGAGTGCTGCGACATGTGCGAGGAGTGCACACCCGAATACATCAGCCAAATACGCGACAAGTTTTCCGGGAAGCTGATATGTGGGCTGTGTGCAGAAGCAGTGAAGGAAGAGATGGAGAAGAAGGGGTGGAAGATAGAAGAAGCAGTGAATGAGCATATGAGCGCCTGTGTGAGGTTTAACAGGTTTGGTAGGACACATCCTGTGTTGTATCAGGCTGAGGCCATGAGAGAAATGTTGAAGAGGAGCTCTAGTATGGAAGGAAGAGCAAGTAGGGCGAAGTCCATGAGTCCTAGAGAAAAGAAGGGCGGTATTGCGAGGAGCTCGAGTTGTATTCCGGCCATCACGAGGGAGTTTTCCATTTTGAATTTTGAAAGTGGGTGTGATGCCATTCTCCCAAGAGATGAGGGGATCCTAAAGGTACCAATTTGA 600 0.4867 MVLGSSSRSDNPRNKPTRLSVEGLQRTLSDISLELSKEDIDNDINLPPISEVENAKCECCDMCEECTPEYISQIRDKFSGKLICGLCAEAVKEEMEKKGWKIEEAVNEHMSACVRFNRFGRTHPVLYQAEAMREMLKRSSSMEGRASRAKSMSPREKKGGIARSSSCIPAITREFSILNFESGCDAILPRDEGILKVPI* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0308 199 Coils Coil 88 108 - -
Vvi4g0308 199 MobiDBLite consensus disorder prediction 138 157 - -
Vvi4g0308 199 PANTHER OS01G0745000 PROTEIN 48 174 IPR012876 -
Vvi4g0308 199 MobiDBLite consensus disorder prediction 138 161 - -
Vvi4g0308 199 Pfam Protein of unknown function (DUF1677) 52 138 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0308 Vvi-Chr4 2669216 2670162 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0308 - - vvi:100252682 402.134