Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0307 ATGGAGTCCGTACAGATGGAGGAGCTCACCTCAGGTGCGAGCGGTCGTATTATACCGGTTTTCAGGAACCTTCGACGGTCAGTGCTCTCGTGGCAGTCGATTCGTCGGTCGCTCATTTTCATCCATTCGATCTTCCTCTGGTTGATACTCCTCTTGCCACGCCACCGCCTTTCCTCGTCTGCGCAGTCGCCCCCAGCGCCGGTGAAATCCTGTAGGAGGAGATCGGTGTTCCGGCGTGATGAGGAGGATACTCTCAAGCGCCGAGCCTTAGCTGAGGGTTTGGAGATGGTGACGGAGAGCGAAGACGGGACGAGCCTGTGCCGGTGCGCTACGTCCTTGTTCTACGGAACCAGAAGGAATGCTTTGTTCTGCCGGTCGTGGTTTCCGGTCGCTGGTGAAATGAAGGGTATTATGATCATCATACATGGGCTTAACGAGCACAGTGGAAGATATGCGGATTTTGCAAAGCAACTAACCTCATGCAGCTTTGGTGTCTATGCAATGGACTGGATAGGTCATGGTGGGAGTGATGGATTGCATGGATATGTACCTTCACTTGATCATGTTGTTGCGGACACTGGTGCTTTCTTGGAAAAGATTAAATCAGAGAACCCGGGGATACCATGTTTCCTTTTTGGTCACTCAACTGGAGGGGCTGTTGTTTTAAAGGCAGCTTCGTATCCTGAGATTGAAGGAATACTGGAGGGAATTGTATTGACCTCCCCTGCTCTGCGTGTGAAGCCAGCCCATCCAATAGTTGGGGCTGTGGCGCCTATATTTTCTCTCGTCGTTCCAAGATACCAGTTCAAAGGTGCCAACAAAAGGGGCATTCCAGTTTCAAGGGATCCTGCGGCAATGTTGGCCAAGTACTCTGATCCTTTGGTCTATACCGGACCCATAAGGGTCCGCACAGGCCATGAGATTTTGCGCATCTCCTCTTACCTGACACGGAACTTCAAGTCTGTAACCGTCCCATTCCTTGTCCTTCATGGAACTGCAGATAGAGTAACTGATCCGCTCGCCTCTCAGGATTTATACACTGAGGCAGCCTCCAGGTGCAAAAACATAAAGCTCTATGATGGCTTCTTGCACGACCTCCTCTTCGAGCCTGAGCGTGAAGAAATCGCACAGGACATCATTGATTGGATGGAGAAGAGATTATGCGGGCATGATTTTGAAAATGTCCACAGCCATTGGTGA 1200 0.5083 MESVQMEELTSGASGRIIPVFRNLRRSVLSWQSIRRSLIFIHSIFLWLILLLPRHRLSSSAQSPPAPVKSCRRRSVFRRDEEDTLKRRALAEGLEMVTESEDGTSLCRCATSLFYGTRRNALFCRSWFPVAGEMKGIMIIIHGLNEHSGRYADFAKQLTSCSFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIKSENPGIPCFLFGHSTGGAVVLKAASYPEIEGILEGIVLTSPALRVKPAHPIVGAVAPIFSLVVPRYQFKGANKRGIPVSRDPAAMLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFLVLHGTADRVTDPLASQDLYTEAASRCKNIKLYDGFLHDLLFEPEREEIAQDIIDWMEKRLCGHDFENVHSHW* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0307 399 Gene3D alpha/beta hydrolase 110 388 IPR029058 -
Vvi4g0307 399 Pfam Serine aminopeptidase, S33 133 371 IPR022742 -
Vvi4g0307 399 FunFam Monoglyceride lipase 108 387 - -
Vvi4g0307 399 PRINTS Alpha/beta hydrolase fold signature 162 177 IPR000073 -
Vvi4g0307 399 PRINTS Alpha/beta hydrolase fold signature 211 224 IPR000073 -
Vvi4g0307 399 PRINTS Alpha/beta hydrolase fold signature 326 340 IPR000073 -
Vvi4g0307 399 PANTHER PHOSPHOLIPASE-RELATED 117 386 - -
Vvi4g0307 399 SUPERFAMILY alpha/beta-Hydrolases 121 387 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0307 Vvi-Chr4 2657853 2663197 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0307 9 387 Acyl Lipid Metabolism Gene Families AT1G73480 51.134 6.23e-136 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0307 - K01054 vvi:100254240 777.319