Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi4g0306 | ATGGCAGAAGAAACGCAGTTCAAATGGGAAGGAAAAGCCACCGCGGAGCTCAAGTCCACCAAGCCTGACCAAGTCTGGCCTTTCTTAGAGGATTTTTGCAGCCTCCACAAGTGGATGCCCAGTCTTGATACTTGCTATCAAGTGGAGGGTGTCAAGGGTCAGCCCGGCCTCATTCGCTACTGCTCCTCCACAGCAGCATCGCCGGACAACCCTGACCAGACCACAGTCAATTGGGTCAAAGAGAAGCTTCTCACCATTGATCCCATCAACCACTGCTTCAGCTATGAGGTTCTCGACAACAACATGGGGTTCAACTCCTATGTGACCACCTTCAAAGTAATCCCGATCAACGGCGGTGGGTGCCTGATCCAGTGGTCCTTCGTTTGTGATCCGGTCCAAGGGTGGAGATACGAGGATTTGGCGTCTTATATCGACTCCTCTCTCCAATTCATGGCTAAGAAGATGGAAGAGACTCTCCAGCACGCAATCTGA | 492 | 0.5183 | MAEETQFKWEGKATAELKSTKPDQVWPFLEDFCSLHKWMPSLDTCYQVEGVKGQPGLIRYCSSTAASPDNPDQTTVNWVKEKLLTIDPINHCFSYEVLDNNMGFNSYVTTFKVIPINGGGCLIQWSFVCDPVQGWRYEDLASYIDSSLQFMAKKMEETLQHAI* | 164 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi4g0306 | 163 | PANTHER | LACHRYMATORY-FACTOR SYNTHASE | 1 | 160 | - | - | |
| Vvi4g0306 | 163 | Gene3D | - | 2 | 162 | IPR023393 | - | |
| Vvi4g0306 | 163 | SUPERFAMILY | Bet v1-like | 20 | 160 | - | - | |
| Vvi4g0306 | 163 | FunFam | Lachrymatory-factor synthase | 2 | 160 | - | - | |
| Vvi4g0306 | 163 | Pfam | Polyketide cyclase / dehydrase and lipid transport | 13 | 159 | IPR019587 | - | |
| Vvi4g0306 | 163 | CDD | PYR_PYL_RCAR_like | 9 | 156 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vvi4g0306 | Vvi-Chr4 | 2657033 | 2657524 | Dispersed/Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi4g0306 | - | - | vvi:104878993 | 350.517 |