Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi4g0305 | ATGGAAGAACCAGAGCCCAGATGGGAAGGCAAAGCCACAGCAGAGCTCAAAACCACCGCACCAGATCAGGTATGGCCTCTACTGGAGGACTTCTGCGGTATCCACAAGTGGTTTCCCGATCTTGATACTTCTTATCAAGTAGAGGGGGAGAAGGGCAAGCCTGGCCTGACTCGGTACTGTGCCAACAACCCCGGCGAGAGTGGCGTCAAGTGGGCTAAGGAGAAGCTCCTCACCATGGATCCTATCCAACGCTGCTTCAGCTACGAGGTTCTCGATAATAATATTGGATTCAACTCCTACGTTGCCACCATCAAAGTATTGCCGGTGGACGGCGGTGGGTGCCGGATCGAGTGGTCCTTCGCGTCCGGTCCGATCGAAGGGTGGAGATCGGATGACTTGGGTTCTTTTGTTGACTCATGTCTCCAATTCATGGCTAAGAAGATGGAAGCTGCCATCAAGAATGAAGACGGAAGCAGCTGCGGATAA | 486 | 0.5309 | MEEPEPRWEGKATAELKTTAPDQVWPLLEDFCGIHKWFPDLDTSYQVEGEKGKPGLTRYCANNPGESGVKWAKEKLLTMDPIQRCFSYEVLDNNIGFNSYVATIKVLPVDGGGCRIEWSFASGPIEGWRSDDLGSFVDSCLQFMAKKMEAAIKNEDGSSCG* | 162 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi4g0305 | 161 | PANTHER | LACHRYMATORY-FACTOR SYNTHASE | 3 | 153 | - | - | |
| Vvi4g0305 | 161 | Pfam | Polyketide cyclase / dehydrase and lipid transport | 12 | 150 | IPR019587 | - | |
| Vvi4g0305 | 161 | CDD | PYR_PYL_RCAR_like | 8 | 149 | - | - | |
| Vvi4g0305 | 161 | FunFam | Lachrymatory-factor synthase | 1 | 153 | - | - | |
| Vvi4g0305 | 161 | SUPERFAMILY | Bet v1-like | 19 | 152 | - | - | |
| Vvi4g0305 | 161 | Gene3D | - | 2 | 159 | IPR023393 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vvi4g0305 | Vvi-Chr4 | 2655415 | 2655900 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi4g0305 | - | - | vvi:100257828 | 347.051 |