Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0296 ATGGCTTCGGATGAGAATCCTTGCTGCGCACTGTTGAAGGAGAGATACTCGAAGTTGGAAGAGAAACGGAATGCTCTCCGGCAAGCCGTGAAGCTTTTGGAGCAACAAATTCAAAAGATTGAATCCGATAATCTCCGTCTTAAGAAAGCATTTGAAGAAGAGCACACACAGGCAGAATTTGAGAGACAGGAGAAACTGAAAGAATCATCCCTTAGAGTTTCTTTGGAGAATGAAATCTCTTCATTGAAGTATGAGATCTCATCCTTGCGGCTAAAAGGGGGCTCGGGAACTCAAGATGGAGATGGGGCTGAAAGGGGAGCAGAAATAAATAGACTGAACAAGCTCCTTGAAGAAGAGAGAATAAGGGCAGATTCAGAGAGGAAGAAAGCTGAAGCTGAGAAGAGTAAAGCTGCTGAGGCATGGAAAATTGTGAAAGCTGAGAAGGGTAAGGCTGATAAAGAAAAGAAGATTGCTAATCTTGAAGGGAAAAAGGCAGAGGAATACAGGCTTCAATTGGAGATATTAAAGAAGGAAGCTGATGAAGCAAGGTCCAAGGCAGAAGATGCAAATAAAAGGTGTGAAAGGGAAAAGCAGAAGGCGGCAAAGGAGAAAAGACGTGCAGATGTGGAGATTTCCAAAGCGGAAGAGCAAAGGAAGCTTGCAGAAGCAAATGAGAAGAAGGCCATGGTAGAAAAATCCCATGCTGATCATCTGTCTAAACAGTTGGAAGAGGATAGACAAAAGATTGAGAAATTACAGAAAGAGATAGATGAACTCGTGTCCTCTAGGAAACAAGTTGAGGCTCTTGCTGTTCCACCTGATAAAAGTGTGAATACCGAAACTTCAAAAATGAAAGCTAGGCAACGGTCAGAAAAGATGAAAAGAGAAGCTGATGATGGAAAGTTGGTCATGGAGTTTCTAAAGTCTGAAGAGGTAAACAAGAAAGTTGATGTAGAAAAACAGAAGGTGACCAGAGAGAAGAAACATGCAGATTTGGAGATGGCAAAAGCAAAGCTTGCAAAAGCAAATAGAAAGAAAGCCATGCAAGAAAAATGTCGTGCCGATCAGTTATCTCTGCAGTTAGAAAAACATAGATGCGGGATTGAGGAATTACGGAAGGAGCTAAATGGGCTTGTGCCTTCTGGAAATTTGGCTGAGGCTCCTGCTGTTCCACCTGAAATGGATGTCACAATTGGAAATATGAAGCTTCTCAAGAAAAAATTGAAGTTTGAAAAGATGCAAGTGAAGCATGCCAAACAAATGGCTAAGTTAGAAAAAGATCGTAATAATATAATGCAGCAAGAATTAAGTCACTTGAAGCAGGACTTTGTTCAATTTTCACATCGCTTGGATATGCTGGATATCTGTCTCTCACATAAAGTTGAAGGTACAAACGGCATAGCAAAGGATGAAGACTTCTCAAACGTGCAACAATTGAACTTGAAGAGAAGACCTTCTGGTGTAGAACCATTTCAGGCATGCCTCCCGAGGGAAAGCAGAATTGTAAATCATTGCTGCACAGCTATAAATTCTTCTGATCTTTTCAGGCCAACCCAAGAACATAATGTACCACTGCTTCCTATATCTGGAGGGAACTCTGTTGGGTCCATCTCAGGTATTGATTCTCAATCAGAGTCTCTGCTTGGAGGCTCTGACCAAAAAATGTTACAGAGTTCTGCCATAAATTCCAGTATGGCATCTTTTTCTGATAGACAGTTGGTGGGCTCACAGGAAAGGGGTGCTTTTTCTGTCACCACATCAACAAAATTAGCTGAAGAGAACTCAAATCCACGACCAACCAGTTCCAGATTTTCTCATGGAGCTACCAAAATGAGGTACAATGGAGAGTTTGCAGTGGTGGCTGAAAATTGTGTCAAGGGTCCTTTTGCTTTTGATGTTGTTGGAAGAGATATTGGGCGTAGTAGGAAGAGGAAGAGGGTTCATGCTGCAGTTGAATCCATTGAAAATTTGCATTCTGAGGATAAAAGGTTGCATCTGCAGGTAGAAGAACAGCTCTCTATTTTGGATGATGAGTCAAAGAGAAACATAAACAAACCATTGGAAGATGGAAGATGTTTGGTTTCTGACCTGCAAGGTGATCCTAATGCAAAGAATGGCTGGTCAAGTAAGAAACCAAGGGTTTCTCATAAAAAGGAAGTGGTTGTAAAGCACTTGTGTCATCCTGACAAGCAAAAAAAGGCAGAGAAACTTGGAACTGAAGACAGTGATGAGGCAAATCCCAGCACTCTAGCATCTGCACTTGCAGGTAATCATACTGGGGCTGCTCAGGGATGCAAGGATGGACTATGTACTTCTGATAGGAGCAATCAAGATGCTTTGCTGAGCTTTGAGGAACAAGTTAATGGGGATTATATGAAATTGCTGGACTTGGATAATGCTGTTGATGAGGCTTTTTATCGAATAGCAATTGAAACTCCTCTATCACCTACTCTTCCTGAGATTGAGATCCATGCTAACCAAGCATATGAAGTAGATAACTCTAATTGTTTGGAGGAAAGTTTTAATGAGATGTTGTCAAATGAAAAACACAATTCAGTGCCATCTCCTAGCTTTGATGTCATCAATTTGGAGATTAATTCCAATCAGTTCAAGTTCAATCTTTCAGATACTTCCCAAAATCCATTGTTGCTTAAGTGTGATTGTCTAGCTGATTCTTTTGAAAAGCCAGAAAATAGTGAGAATGCTATTCATAGTCCTATATATTGTGAGGGAAAAACTTGTTCTAATCAGATTTTTGGATCCAATGCTGAGGAGGGGATGCCAAATATATCTGTTTCTATAAATGAGGGAGCAAAATTTCTTAGTGAAGATGAAGTTGGAGCTCCTCATGATAATATTCCTGAATTCTGTATCGTGTTTTCAGATACCAAGGAGAATAGCTGCATTTCTAGGATATTATGTGCCATCAGGACCTGTATAGCTCACTGCCATTTGGTTTCTCGATCAGATTGGATGGTGGAAGAAATTATGCATGCTCTTTTAATGGAAGTAGATCTTCTGCCCAAGGAGAAAGCTTGTGTGCTCTTTTCGCTACTATTGCACAACCTTTCTGGAGCTGCGTTAAAGATATGCCAGAACATTTTAACTGGAGAGTCTATCTGCTGCTTAGACTCTTTTTCTGCACAGATAAACACAGTGATGTCCAATGTAGAGATGAGAAGCTTGTTTGCAAAGTTATGTCATTTGGATGAGCTACTTAGTCTTATCGAGGAGTTCCTTATGGGTAAAAAAGTTCTGGTGTATAATAATGCATCTCCTGAATCATTCGTAGTATGCGATTCAAGATTCAGCATTCTTGTGGATGGGGTAGATAGAATTATGTCCTTTGAAACAGCTTCAACTCACCAGTTGGTGGCAGGGAGTATCATATTAGCATCAATTTGCACGGCTATTGACCACATCGGTTTTATCTGTGAGGCTTCATATGATATTTTCCGGATGCACAGATCTGATTCTTCATTGCTGCTGACAATTCTTCATGTTTTTGCTCATGTCTGTGGAAAAAAATATTTTACCTTGAGCAATTACTGTTTGATAATGACCGTTATGAAATCTTTAGTTACGATTAGTGAGGGACGGAATTTGTCAATCAAAACTACATCCTGTCTTTCATCTCAGAGTAAGGTTCAAAATGAGTTTCCTCCATGCATCAAATGCCCATTTTCTCAGAATGCAGCTTCTGTGGATATTGTCATATCGCTGCTCTTGGAGAAGCTTCAGGATTATGCCATTTCAGATGCTGTGGATCAAGAGCTAATCAAATCAGACAAGTCATTGAATTCTGGATCCCTGTCCAGCGAGGATAAAGCTGAAAAAAAATCTCATCTACAAGAGGCTTTCTGTGTTCACTCAATGAAATGTGACATGCCTTGTTGTTTTAACGACTTTGTGATGCCTGCAATTCAGTCAGGATCTGATTTTAACAGAACGTTGTGCCACTTCATTGATATCCTGTCATTGGTGGAGCTTGTCGCCAGCAGTATGAGCTGGGAGTGGACATGCAACAAAGTTGTCCCTCGCCTGCTGAAAATGTTGAATTTGTGTGATATGGATGACACTTCTGCAGCAATTGTCATTCTTCTTGGCCAACTGGGAAGGATTGGAGTTGATGCTGGTGGGTACGAAGACACTGGGGTTGAGACTGTCAGATGTGGATTATACTCTTATCTCTGCAAGATAATAACAAGGAAAACCTGCCTTCCTCTTCACATTTCCACCATCACTGCTTTGCTTGGGCTTCTCTCGGTTGAGTTGAAAGAATTTGTTCAGACTGATGTGGTGGATCTCCCAGACGTCACTAGTAAGTCTGCTCTTGTTCATGATATAAGGAACTGTTTTTCTTCGCTGAGCAAGGAGCAACAGTCCTTCTCAGTTAGCCTTATCCAGTCCTTCGATGTTCATAAGAATGAAAATGCTCAATGTAGTTACAGAATTGGACATCTTGGTACTGCTAGTGCACTCTGA 4485 0.4085 MASDENPCCALLKERYSKLEEKRNALRQAVKLLEQQIQKIESDNLRLKKAFEEEHTQAEFERQEKLKESSLRVSLENEISSLKYEISSLRLKGGSGTQDGDGAERGAEINRLNKLLEEERIRADSERKKAEAEKSKAAEAWKIVKAEKGKADKEKKIANLEGKKAEEYRLQLEILKKEADEARSKAEDANKRCEREKQKAAKEKRRADVEISKAEEQRKLAEANEKKAMVEKSHADHLSKQLEEDRQKIEKLQKEIDELVSSRKQVEALAVPPDKSVNTETSKMKARQRSEKMKREADDGKLVMEFLKSEEVNKKVDVEKQKVTREKKHADLEMAKAKLAKANRKKAMQEKCRADQLSLQLEKHRCGIEELRKELNGLVPSGNLAEAPAVPPEMDVTIGNMKLLKKKLKFEKMQVKHAKQMAKLEKDRNNIMQQELSHLKQDFVQFSHRLDMLDICLSHKVEGTNGIAKDEDFSNVQQLNLKRRPSGVEPFQACLPRESRIVNHCCTAINSSDLFRPTQEHNVPLLPISGGNSVGSISGIDSQSESLLGGSDQKMLQSSAINSSMASFSDRQLVGSQERGAFSVTTSTKLAEENSNPRPTSSRFSHGATKMRYNGEFAVVAENCVKGPFAFDVVGRDIGRSRKRKRVHAAVESIENLHSEDKRLHLQVEEQLSILDDESKRNINKPLEDGRCLVSDLQGDPNAKNGWSSKKPRVSHKKEVVVKHLCHPDKQKKAEKLGTEDSDEANPSTLASALAGNHTGAAQGCKDGLCTSDRSNQDALLSFEEQVNGDYMKLLDLDNAVDEAFYRIAIETPLSPTLPEIEIHANQAYEVDNSNCLEESFNEMLSNEKHNSVPSPSFDVINLEINSNQFKFNLSDTSQNPLLLKCDCLADSFEKPENSENAIHSPIYCEGKTCSNQIFGSNAEEGMPNISVSINEGAKFLSEDEVGAPHDNIPEFCIVFSDTKENSCISRILCAIRTCIAHCHLVSRSDWMVEEIMHALLMEVDLLPKEKACVLFSLLLHNLSGAALKICQNILTGESICCLDSFSAQINTVMSNVEMRSLFAKLCHLDELLSLIEEFLMGKKVLVYNNASPESFVVCDSRFSILVDGVDRIMSFETASTHQLVAGSIILASICTAIDHIGFICEASYDIFRMHRSDSSLLLTILHVFAHVCGKKYFTLSNYCLIMTVMKSLVTISEGRNLSIKTTSCLSSQSKVQNEFPPCIKCPFSQNAASVDIVISLLLEKLQDYAISDAVDQELIKSDKSLNSGSLSSEDKAEKKSHLQEAFCVHSMKCDMPCCFNDFVMPAIQSGSDFNRTLCHFIDILSLVELVASSMSWEWTCNKVVPRLLKMLNLCDMDDTSAAIVILLGQLGRIGVDAGGYEDTGVETVRCGLYSYLCKIITRKTCLPLHISTITALLGLLSVELKEFVQTDVVDLPDVTSKSALVHDIRNCFSSLSKEQQSFSVSLIQSFDVHKNENAQCSYRIGHLGTASAL* 1495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0296 1494 PANTHER MATERNAL EFFECT EMBRYO ARREST 22 3 1469 - -
Vvi4g0296 1494 MobiDBLite consensus disorder prediction 180 210 - -
Vvi4g0296 1494 MobiDBLite consensus disorder prediction 586 606 - -
Vvi4g0296 1494 MobiDBLite consensus disorder prediction 724 742 - -
Vvi4g0296 1494 Coils Coil 72 92 - -
Vvi4g0296 1494 Coils Coil 165 233 - -
Vvi4g0296 1494 Coils Coil 354 374 - -
Vvi4g0296 1494 MobiDBLite consensus disorder prediction 222 244 - -
Vvi4g0296 1494 Coils Coil 422 442 - -
Vvi4g0296 1494 Coils Coil 143 163 - -
Vvi4g0296 1494 Coils Coil 235 269 - -
Vvi4g0296 1494 Coils Coil 9 68 - -
Vvi4g0296 1494 MobiDBLite consensus disorder prediction 696 715 - -
Vvi4g0296 1494 Coils Coil 325 345 - -
Vvi4g0296 1494 MobiDBLite consensus disorder prediction 271 297 - -
Vvi4g0296 1494 Coils Coil 109 136 - -
Vvi4g0296 1494 MobiDBLite consensus disorder prediction 280 297 - -
Vvi4g0296 1494 MobiDBLite consensus disorder prediction 724 750 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0296 Vvi-Chr4 2572213 2580989 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0296 - - vvi:100261159 2858.17