Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0295 ATGGCTGTTACCATGAAACAAATGTCAGTTATTGTGACAGCTTTAGGTGTAGCTTCCTTCATATTTGGGATTGTTGCTGAAAATAAGAAGCCTCCTTCTGGAACTCCTACTGTGGGGACAGGTGTGATTATTTGCAAGTATCAGTCAGATCACACCATTCTTTTGGGCTTTCTCTCCTTTGGATTTCTAGCTGCATCTTCTGCAGCTGGGCTGGGCTCTGTTTTCTACCCCTTCAAAGGAAAATCCATTCCTTACAACGCTTTATTCCGAAACACCACCTTCACTATCTTCTTCAACATTACCCTGGGTTTGGTGGGAATGGCAGCAGCCTTCGTGTTATGGCCAACATTGACAGAGCTACATCACCGGGTCCACAATCTTCATGACAATCTCAAGAAAGAGTGCCCCACTGCTAAGACTGGCCTTATTGGTGGGGGTGGGGTCCTATCCTTCTGTTCATCCCTCTTCTGGCTGATTTCCCTTATGCTAACAGACAATGTAAGAGAGGATTACTTTGAAGAAATGGATCCCCAAGGTGTGATGGCAGCTACTATCAAGCAGATGTCCATCATTGTGGCAACGCTTGGAACATTGTCCTTCATGTTTGGAGTAATTGCTGAAAATAAGAAGCCAGATTCTGGAACTGCAACTCTACGGGAAGGTGTTGTAATTTGCAAATATTCGTCGGATCCTACTGTTGTCTTGGGGTATCTGTCAGTTGCGTTTCTAGTTGCATCTACTGTGGCTGGGTATTTGTCTCTATTTTACCCGTACAAAGGAAGATCTATTCCACAAGCTGCTTTGTTTCGAAGCACCAGCTTCCTTGTATTCTTCAATATCGCTTTGGGTATGGCTGGATTGGCAGCAGCAATGTTGTTATGGCCAACAATCACAGAGCAACTTCACTTGATACGCAACGTTCATCACAACCTGAACACTACATGCCCCACTGCCAAGACTGGTCTCCTTGGTGGCGGTGCCTTCATAGCCCTCGATGCTTCCCTCTTCTGGTTGGTTTCCCTAATGTTAGCTGACAATGTGCGAGAGGACTACTTTGAAACAGTGGAAAAGGACCCTAAGGGTGAACAAAGCGAGGTTCTCACAAATGAATATAGTTCAAATGTACCTGTAAAGGGCATTGCTTAA 1146 0.4503 MAVTMKQMSVIVTALGVASFIFGIVAENKKPPSGTPTVGTGVIICKYQSDHTILLGFLSFGFLAASSAAGLGSVFYPFKGKSIPYNALFRNTTFTIFFNITLGLVGMAAAFVLWPTLTELHHRVHNLHDNLKKECPTAKTGLIGGGGVLSFCSSLFWLISLMLTDNVREDYFEEMDPQGVMAATIKQMSIIVATLGTLSFMFGVIAENKKPDSGTATLREGVVICKYSSDPTVVLGYLSVAFLVASTVAGYLSLFYPYKGRSIPQAALFRSTSFLVFFNIALGMAGLAAAMLLWPTITEQLHLIRNVHHNLNTTCPTAKTGLLGGGAFIALDASLFWLVSLMLADNVREDYFETVEKDPKGEQSEVLTNEYSSNVPVKGIA* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0295 381 PANTHER OS07G0462200 PROTEIN-RELATED 2 168 - -
Vvi4g0295 381 Pfam Protein of unknown function (DUF1218) 82 154 IPR009606 -
Vvi4g0295 381 Pfam Protein of unknown function (DUF1218) 241 334 IPR009606 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0295 Vvi-Chr4 2564468 2571005 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0295 - - vvi:100247379 382.104