Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0289 ATGGGAAACCCTAAATCATTCAAGATCCCTATAAATTCTCCGCTGGCAACCACTCTCAAATCTTCTATTTCTCACAAGCTTCTCGAATTCCTTGGAAACTACACCGATGACGTGCTCGCTGAGTATATTACAGTGCTCGTTTGTAATGGAAAGCATCGAAATCAAGCTAGAGATGATTTGGAGGCATTTCTTGGAGAACGGAGTGAGGAATTTGTATCATGGTTATGGGATCTTCTCTTGGACTATGCCAATCAATCAAATACAAGCATTGTCCCATTGGATCCCAAGGGTGTCACCTTCAGCAGTCCCCATGACAATGACGCTGATATGGAGTACAGAGCTAAAAGGTCAAGGAACTTTCATAATCATGGCACCAGCAATGATGATGGATCACCTGTAATATCGACTGAAGGTGAGGAGTTGCGCCACCCATCAACCTATGCTTTTTATACTCTTCCAGATGATACAGACTTTTCTGAGGGCTTTCAACGGTCTGCAGGTTTTGCTGCACCTTCAAATGATATTAATACTGAGAAGGTATCCTTACTGATGTCTGGAAATGGTATGCGAAGTGAACTTGAGCCAGTTGAGGACATTTATGATGATTTTTTGGCACATGGATGTTCTGGAAAGGATAGCTTTTCAGTGATGCCAGCTAGTGGAGAAGAAAGAATTCTCTACATGGATAAATATCAGAAGATTGTTGATAGTAAAGCCATTGACTTGCCTAAAAAACTTTTCTCACCCTCAAAACAGCCATATCCTAGAAGATTACAGTCTTCTATTGCAGATAATCCTCTTCCCAGGCAAACATCTTCTGCCAATGCATATGGAAGAAGTCTTTCTCCCAAAGTGGTCACTGCAGTATCCCACCAGTATGACAAGTCACGGGGTAGTGTTTGGGATAGATTGGGCAAACCGCAAAAAAATACATTTGAAAGGAGCAAAACTGTTGATGCACCTGGTATTTCTATTAGAGAGCAAAATGGAGTTTTTCTAGACCAGAGTGTACCAGTGCTTCCTTCGCCAACTGAAAGACATAGTAAACAAGAAGCTCCTGGGCTTGGTAATGGTGCTTACAATTCTGGAAAATGTAAGAAATTGGAGAGTGGTGTGAGTAATACTGGCAAACTAAATGGTGCCAGTAATATCAGCCGAAAGAGGCACTTTGGTGAGAGTAGTACTGGCCCAGGTAACAGTTCAGTTTCTTTGGTGGACAAGGGGAACATGGATGTTCAATATAAAGAAACTTCAGGAGATTCCAAAAAGACAAAACTGGCCGAAGAGGTTTCAGAGGCAACATTTGCTCAGGTTTCTGGATGTTTTTATGTGGATGCTAAATTTGAGTTTAAGAAATGA 1359 0.415 MGNPKSFKIPINSPLATTLKSSISHKLLEFLGNYTDDVLAEYITVLVCNGKHRNQARDDLEAFLGERSEEFVSWLWDLLLDYANQSNTSIVPLDPKGVTFSSPHDNDADMEYRAKRSRNFHNHGTSNDDGSPVISTEGEELRHPSTYAFYTLPDDTDFSEGFQRSAGFAAPSNDINTEKVSLLMSGNGMRSELEPVEDIYDDFLAHGCSGKDSFSVMPASGEERILYMDKYQKIVDSKAIDLPKKLFSPSKQPYPRRLQSSIADNPLPRQTSSANAYGRSLSPKVVTAVSHQYDKSRGSVWDRLGKPQKNTFERSKTVDAPGISIREQNGVFLDQSVPVLPSPTERHSKQEAPGLGNGAYNSGKCKKLESGVSNTGKLNGASNISRKRHFGESSTGPGNSSVSLVDKGNMDVQYKETSGDSKKTKLAEEVSEATFAQVSGCFYVDAKFEFKK* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0289 452 MobiDBLite consensus disorder prediction 250 276 - -
Vvi4g0289 452 MobiDBLite consensus disorder prediction 253 276 - -
Vvi4g0289 452 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 14 3 136 IPR040366 GO:0008143|GO:0043488|GO:1900364
Vvi4g0289 452 Gene3D PWI domain 6 91 - -
Vvi4g0289 452 SUPERFAMILY PWI domain 17 85 IPR036483 GO:0006397
Vvi4g0289 452 MobiDBLite consensus disorder prediction 376 406 - -
Vvi4g0289 452 Pfam PWI domain 18 84 IPR002483 GO:0006397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0289 - - vvi:100854295 881.322