Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0283 ATGTTCAAATGCCGGATGGCTCATGGTATGGGAGCTGGGGAGTTTGCTTTGTTAGGAAGTAAAAGGTTGCAGTTTTCTGCTCGGATCAAAGCGAGAAGATGGAGGTTGGGGGAGAGCTATCTTTCATGTCCCAAGAAAGAGTATGTGCCTCTGGAAGGCGAGCAATCGAATTTGGTACAAACTGCATGGTCATTGATGGGGCTAATTCCAGCTGGACAGGCTGAGAGAGACCCACCACCTCTTCATCGTGCTGCAAAGCTACTGATCAATTCACAAATGGAAAATGGAGATTTCCCACAACAGGAAATTACAGGAGCTTTTCTGAGGAATTGCATGCTACATTATGCAGCATACAGAAGCGTCTTCCCTCTCTGGGCCATAGGAGAATACAGATCAAGGGATCAAAATTTCTTTGGAGAAACTATTTTTTTTTTAAAAAAAAAAACAATTATACTTTTTATAATTTTTTAA 471 0.4161 MFKCRMAHGMGAGEFALLGSKRLQFSARIKARRWRLGESYLSCPKKEYVPLEGEQSNLVQTAWSLMGLIPAGQAERDPPPLHRAAKLLINSQMENGDFPQQEITGAFLRNCMLHYAAYRSVFPLWAIGEYRSRDQNFFGETIFFLKKKTIILFIIF* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0283 156 Pfam Squalene-hopene cyclase C-terminal domain 51 131 IPR032696 -
Vvi4g0283 156 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 37 136 IPR008930 -
Vvi4g0283 156 Gene3D - 30 139 - -
Vvi4g0283 156 PANTHER TERPENE CYCLASE/MUTASE FAMILY MEMBER 23 133 IPR018333 GO:0005811|GO:0016104|GO:0016866
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0283 Vvi-Chr4 2484776 2491888 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0283 K15813 - qsu:112029584 180.644