Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0274 ATGAAGTCCTGTACCAGCCCCTGTGACACCCATATCAACCTTGAGTTCTCAGGCAGACATGCCTCAGTCCCTGATCAGGTTGATGAACCAATTCAGATCAATGTCCCTTTACTTCTACAGCCATCCTATGCCAGATCAAAATCAAGCATCTTTGATGAGCTTCGCCACTTCAGAATGAGCCTAAAATGGTGTGCTCTTGATCACTCTTCATGGGCAGGGAAGTCCATATCATGCCTCACATTCATAGTCCTCGCCATCATCGTCCCCATCTTGAGCTCCCTGTTCATTGAACCCCCATCTTCTTCATCAACTAAAGACCCAATCTCATTCAACAAACTGGTGCAACTGCCTGAGTCAGGCTTAGCTGCAATAGCCTTTTTCACACTATCCCGCTTCTTCCAACAGTACGGCCTCCGCCATCTCCTGTTCCTGGACGACCTTATGGATGACTCATTGTATGTCAGACGAGGATACACCCGAGAGCTTGACAAGGCCTTCAGATTCCTAGCATTCATACTTCTGCCATCCCTTTTTGTAGAACTTGCACATAAGATCTTATTCTTCTCAACAGTGAGAATTTCTATACCACATATTCCCTCAGGGGTTCCACTAAATTCCATTGCGTTTGTACTGGTTTTGGCATCATGGATTTATCGAACAGGCTTGTTCTTGCTAGTCTGTGTTCTATTCAGGTTGACATGTGAGCTCCAAATACTCAGGTTTGAAGGGTTCCAGAAGCTTCTAGAGGGATGTGGGTCAGACGCCGGTGTCATATTCCGGGAACATATGAGGATCAGAAAACAATTATCAGTCACCAGCCACAGATACAGGTTCTTCATCATCGGATGCCTGATTACAATCACAGTGAGCCAACTGGGAGCCTTGTTGATAGTTTTGGCATCAAAATCAAACAAGACTTTCTTCAATTCTGGAGACCTTGTAGTTTGCTCAGCTGTTCAGCTAAGTGGGTTCTTGCTATGTCTTCTTGGGGCTGCAAGAATCACACACAGAGCTCAAAGGATGGTGTCTGTCGCAACCAGATGGCATATGCTAGTAACATGTGCCACCATCAACCTTCATCCCGATGCCAGTTCAGACCAGTGGAGAGGCATAATCCAAGGGCCTGATCCTGATCACACCCTTCTGCCATCAAAATTCGACGACACCGTTTCAGATTTGTCACAAACTCTGATCACAGTCTCATCACAGGATCTATCTTCCTTCCAAACTAGCTGGCAAGCTTTAGGTCAGTAA 1254 0.4593 MKSCTSPCDTHINLEFSGRHASVPDQVDEPIQINVPLLLQPSYARSKSSIFDELRHFRMSLKWCALDHSSWAGKSISCLTFIVLAIIVPILSSLFIEPPSSSSTKDPISFNKLVQLPESGLAAIAFFTLSRFFQQYGLRHLLFLDDLMDDSLYVRRGYTRELDKAFRFLAFILLPSLFVELAHKILFFSTVRISIPHIPSGVPLNSIAFVLVLASWIYRTGLFLLVCVLFRLTCELQILRFEGFQKLLEGCGSDAGVIFREHMRIRKQLSVTSHRYRFFIIGCLITITVSQLGALLIVLASKSNKTFFNSGDLVVCSAVQLSGFLLCLLGAARITHRAQRMVSVATRWHMLVTCATINLHPDASSDQWRGIIQGPDPDHTLLPSKFDDTVSDLSQTLITVSSQDLSSFQTSWQALGQ* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0274 417 Pfam Protein of unknown function (DUF3537) 52 410 IPR021924 -
Vvi4g0274 417 PANTHER RAS GUANINE NUCLEOTIDE EXCHANGE FACTOR K 32 410 IPR021924 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0274 Vvi-Chr4 2388754 2390093 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0274 - - vvi:100262807 809.29