Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0272 ATGGTGTTGTGGGTTTTTGGCTATGGTTCTTTGGTATGGAACCCAGGATTTGATTATGATGAGAAGGTGATTGGCTTCATCAAGGATTACAAGCGTGTTTTTGATCTTGCATGCATTGATCACAGAGGTACACCAGAACACCCTGCAAGAACTTGCACATTGGAACAAAGTGAAGGAGCCATATGCTGGGGTGCTGCTTTTTGTGTTCGTGGTGGCCCTGAGAAGGAGAGACTGGCTATGGAGTATTTGGAGCGGAGAGAGTGTGAGTATGATTGTAAGACTCTTGTAGATTTCTACAAGGAAGGGAATACCTCGGCTCCGGCTTTAACAGGAATTATAGTTTTTACTTCCACTCCTGACAAGGTATCAAACAAGTACTACCTTGGCCCAGCCCCATTAGAGGATATGGCCAGGCAAATTGCAACTGCTGTGGGGCCATGTGGGAATAACAGAGACTATCTTTTCTTGTTAGAGAAGGCCATGTTTGATATTGGTCATGAGGATGACATGGTGATAGAACTGGCCAGTGAAGTGAGGAAGGTGCTGGGAATGGTGGGAAAAGGATCAGTCAAAGAGAAGAAATTGGTAGGGCTTCCTCATCTTCTACCAGCTCATATGTCGGCCATTCAACTGCATCTCCTCCCAGAAGTCATTACCCTGGACTCCTAA 669 0.4574 MVLWVFGYGSLVWNPGFDYDEKVIGFIKDYKRVFDLACIDHRGTPEHPARTCTLEQSEGAICWGAAFCVRGGPEKERLAMEYLERRECEYDCKTLVDFYKEGNTSAPALTGIIVFTSTPDKVSNKYYLGPAPLEDMARQIATAVGPCGNNRDYLFLLEKAMFDIGHEDDMVIELASEVRKVLGMVGKGSVKEKKLVGLPHLLPAHMSAIQLHLLPEVITLDS* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0272 222 Gene3D - 2 165 - -
Vvi4g0272 222 PANTHER CATION TRANSPORT PROTEIN CHAC-RELATED 1 190 IPR006840 GO:0006751|GO:0061928
Vvi4g0272 222 FunFam Gamma-glutamylcyclotransferase 2 185 - -
Vvi4g0272 222 Pfam ChaC-like protein 3 180 IPR006840 GO:0006751|GO:0061928
Vvi4g0272 222 CDD GGCT_like 5 110 IPR013024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0272 Vvi-Chr4 2370339 2371898 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0272 K22596 - vvi:100261255 461.84