Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0269 ATGAGGATAGAAGAGGATGGAGATCGTGTCTCTGCGTCCAGGCAGCATCTGGTCTTTGCTTACTATGTCACTGGCCACGGCTTCGGCCATGCCACTCGTGTTGTTGAGGTTGTTCGGCACCTCATTCTTGCAGGACATGATGTTCATGTTGTTTCTGCAGCCCCAGACTTTGTTTTTACTTCTGAAGTACAGTCCCCTCGGCTCTTCATTCGCAAGGTATTGCTAGACTGTGGAGCTGTTCAAGCCGATGCATTGACAGTGGATCGGCTTGCCTCCCTGGAGAAGTATTCTGAGACAGCTGTGGCACCTCGAGCTTCTATTTTGGCAACAGAAATAGAGTGGCTGAACTCCATCAAGGCTGACTTAGTGGTTTCTGATGTTGTTCCTGTTGCATGCCGTGCAGCAGCTGATGCAGGAATTCGGTCTGTTTGTGTCACTAACTTCAGTTGGGACTTCATATATGCTGAGTATGTAATGGTGGCTGGAAATCATCATCGTTCAATAGTTTGGCAGATAGCAGAGGATTATTCTCATTGTGAATTTCTAATCCGCCTTCCAGGATACTGCCCAATGCCTGCTTTCCGTGATGTTATTGATGTGCCTCTTGTTGTGAGGAGGTTGCATAAATCCCGAAAGGAGGTGAGGAAGGAGCTTGGAATTGGGGAGGATGTGAAGCTAGTTATCTTCAATTTTGGTGGACAGCCAGCAGGCTGGAAGTTAAAGGAGGAGTACTTGCCTTCTGGTTGGCTTTGCCTGGTATGTGGTGCTTCTGACAAGGATGAACTTCCTCCAAATTTTCTGAGGCTTGCAAAAGATGTGTATACACCTGATCTTATAGCAGCATCTGATTGTATGCTTGGAAAAATTGGATATGGCACTGTAAGTGAAGCTCTGGCGTTCAAGTTACCATTTGTCTTTGTTCGTAGAGATTATTTCAATGAGGAACCATTTTTGAGAAATATGCTTGAGTACTATCAAGGTGGCGTTGAGATGATTAGGAGAGATTTGCTCACTGGTCATTGGTTACCTTACCTTGAACGTGCCATTAGTTTGAAACCATGCTATGAGGGTGGCATTGATGGTGGTGAGGTGGCAGCTCGAATATTGCAGGATACTGCTATAGGAAAAAACTATGCATCAGATAAGTTTAGTGGTGCAAGGAGACTGCGAGATGCAATAGTTCTTGGCTATCAACTGCAAAGGGCACCTGGTAGAGATGTCTGCATCCCTGATTGGTATGCAAATGCTGAAAATGAACTTGGTCTGCGTACTGGATTGCCAACCATTGAAATGAACGATGATAGCTCCCTCATGAATTCGTGCACCGAAGACTTTGATATTCTTCATGGAGATGTTCAGGGCCTTTCAGATACAATGAATTTCTTAAAGAGCTTGGTGAAATTGGATGCTGCTTATGACTCCGGAAAGGATACTGAGAAGCGTAAGATACGGGAGCGAGTTGCTGCTGCTGGACTGTTCAATTGGGAGGAAGAAATCTTTGTAGCAAGAGCCCCTGGAAGGTTGGATGTAATGGGAGGTATTGCAGACTATTCAGGAAGCCTTGTTTTGCAGATGCCTATTAGAGAAGCCTGCCATGTTGCTGTTCAAAGAAACCATCCAAGCAAGCAGAGGCTCTGGAAACATGCCCAGGCTCGGCAGCATGCAAAGGGACAAGGACCAACACCTGTTCTGCAAATTGTATCATATGGGTCAGAATTGAGTAACCGTGGTCCAACCTTTGACATGGATTTATCCGATTTCATGGATGGAGATCAGCCAATGTCATATGAGAAGGCAAAAAAATATTTTGCCCAAGATCCATCACAAAAGTGGGCAGCATATGTTGCAGGGTCGATCCTGGTTTTAATGACAGAATTAGGTGTTCGCTTTGAAGACAGTATCAGCATGCTGGTTTCTTCTGCAGTCCCCGAAGGCAAGGGTGTTTCTTCTTCGGCATCTGTGGAGGTTGCTAGCATGTCTGCTATTGCTGCTGCTCATGGACTGAACATCAGCCCAAGAGATCTTGCTTTACTCTGCCAAAAGGTAGAGAACCACATTGTTGGAGCTCCATGTGGTGTAATGGATCAGATGACTTCAGCATGCGGTGAAACCAATAAACTTCTTGCAATGATCTGCCAGCCTGCTGAGGTAGTAGGACATGTGGAAATTCCTGGCCATATACGATTCTGGGGAATTGATTCAGGAATACGGCACAGTGTTGGAGGTGCAGACTATGGATCTGTGAGAATTGGTACATTTATGGGTCGAAAGATGATAAAGTCCATGGCAGCTGCAGTGTTGTCCAGATCATTGCCAAGTTCTAATGGGATAAGTCATTATGAGTTGGAAGAGGAAGGCGGGGAACTACTTGAAGCGGAAGCTTCGTTAGATTATTTATGCAACCTTGCACCTCATAGATATGAAGCTCTTTACGCTAAGATGCTTCCTGAATCCATGCTTGGTGAGACATTTTTGGAGAGGTATGCTGACCACAATGATTCAGTCACTGTAATTGATCACAAGCGGAGTTATGGAGTGAGAGCAAATGCTAGACATCCCATTTACGAAAATTTCCGAGTGAAGGCCTTCAAAGCACTACTCACTTCTGCAGCATCGGATGAGCAACTTACTTCTCTTGGAGAACTTCTGTATCAGTGCCACTACAGTTACAGTGATTGTGGGCTCGGATCAGATGGGACAGATAGGCTTGTACAATTGGTCCAGGAAATGCAGCACAATAAAGTGTCTAAATTTGAAGATGGAACCTTATATGGGGCAAAGATCACTGGAGGGGGCTCTGGTGGAACAGTTTGTGTGATAGGCAGGAACTGCCTAAGGAGCAGCCAACAAATCCTCGAGATTCAGCAGAGATACAAAGGCGCAACGGGCTATTTACCTCTGGTGATTGAGGGCTCATCACCAGGTGCAGGGAAGTTCGGTTATCTGAGAATCCGCCGTCGATTCCCTCCAAAGCAGAGTGTCGTCTCTCTTCAAAGCAACTACAATTGA 3009 0.4563 MRIEEDGDRVSASRQHLVFAYYVTGHGFGHATRVVEVVRHLILAGHDVHVVSAAPDFVFTSEVQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVAPRASILATEIEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSWDFIYAEYVMVAGNHHRSIVWQIAEDYSHCEFLIRLPGYCPMPAFRDVIDVPLVVRRLHKSRKEVRKELGIGEDVKLVIFNFGGQPAGWKLKEEYLPSGWLCLVCGASDKDELPPNFLRLAKDVYTPDLIAASDCMLGKIGYGTVSEALAFKLPFVFVRRDYFNEEPFLRNMLEYYQGGVEMIRRDLLTGHWLPYLERAISLKPCYEGGIDGGEVAARILQDTAIGKNYASDKFSGARRLRDAIVLGYQLQRAPGRDVCIPDWYANAENELGLRTGLPTIEMNDDSSLMNSCTEDFDILHGDVQGLSDTMNFLKSLVKLDAAYDSGKDTEKRKIRERVAAAGLFNWEEEIFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVAVQRNHPSKQRLWKHAQARQHAKGQGPTPVLQIVSYGSELSNRGPTFDMDLSDFMDGDQPMSYEKAKKYFAQDPSQKWAAYVAGSILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNISPRDLALLCQKVENHIVGAPCGVMDQMTSACGETNKLLAMICQPAEVVGHVEIPGHIRFWGIDSGIRHSVGGADYGSVRIGTFMGRKMIKSMAAAVLSRSLPSSNGISHYELEEEGGELLEAEASLDYLCNLAPHRYEALYAKMLPESMLGETFLERYADHNDSVTVIDHKRSYGVRANARHPIYENFRVKAFKALLTSAASDEQLTSLGELLYQCHYSYSDCGLGSDGTDRLVQLVQEMQHNKVSKFEDGTLYGAKITGGGSGGTVCVIGRNCLRSSQQILEIQQRYKGATGYLPLVIEGSSPGAGKFGYLRIRRRFPPKQSVVSLQSNYN* 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0269 1002 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 23 342 - -
Vvi4g0269 1002 SUPERFAMILY GHMP Kinase, C-terminal domain 727 978 IPR036554 -
Vvi4g0269 1002 Gene3D - 490 730 IPR014721 -
Vvi4g0269 1002 FunFam GHMP kinase-like 208 350 - -
Vvi4g0269 1002 FunFam L-arabinokinase 490 729 - -
Vvi4g0269 1002 FunFam L-arabinokinase 832 964 - -
Vvi4g0269 1002 Pfam GHMP kinases N terminal domain 637 702 IPR006204 GO:0005524
Vvi4g0269 1002 SUPERFAMILY Ribosomal protein S5 domain 2-like 497 716 IPR020568 -
Vvi4g0269 1002 Pfam Galactokinase galactose-binding signature 496 537 IPR019539 -
Vvi4g0269 1002 Gene3D Glycogen Phosphorylase B; 11 163 - -
Vvi4g0269 1002 PIRSF Gal_kin_glcsltr 1 989 IPR012369 -
Vvi4g0269 1002 Pfam GHMP kinases C terminal 874 959 IPR013750 -
Vvi4g0269 1002 Gene3D Glycogen Phosphorylase B; 208 350 - -
Vvi4g0269 1002 Gene3D - 832 962 IPR036554 -
Vvi4g0269 1002 FunFam L-arabinokinase 16 168 - -
Vvi4g0269 1002 PRINTS Mevalonate kinase family signature 683 702 - -
Vvi4g0269 1002 PRINTS Mevalonate kinase family signature 504 528 - -
Vvi4g0269 1002 PRINTS Mevalonate kinase family signature 925 942 - -
Vvi4g0269 1002 PRINTS Mevalonate kinase family signature 640 662 - -
Vvi4g0269 1002 PANTHER SLR1395 PROTEIN 1 715 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0269 Vvi-Chr4 2344376 2360860 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0269 K12446 - vvi:100267958 1980.3