Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0248 ATGGCTTCTTCAGCTGTGCTCTTCTCCTCTGTCAGAGCCTGTGAATTCTCCAAACCACAAACCCTAATCCCTCGTTCGAATTCGCCATTGATCGTCTCGATTCCTCTTCATCGTCGGCGTCACAAGAACGGAAGAGTCTTCGCTTCGATCTCGGTCACCAGCCCGGAAGTGCGGACCGGTCCGGACGATCTCGTCGCCTCAATTCTTTCCAAGGTTGCACAAACAGATCGAGGAGTTTTGCTAACTAAAGACAAACATAAAGAGGTAGCTGAAGTTGCTCAAGAATTGCAGAAATACTGCGTTACAGAACCAGTAAAATGCCCTCTTATCTTTGGAGAGTGGGACGTGGTGTACTGTTCAAATCCAACCTCGCCTGGGGGTGGCTATAGGAATGCATTCGGCCGGTTATTTTTCAAAGCAAAGGAAATGATTCAGGTTGTTGAAGCCCCTGATATCGTGAGAAACAAAGTGCACTTTTCTGCTTTGGGTTTCCTTGATGTAGAGGTCTCTTTGAAAGGAAAACTGAAGGCCTTGGATGATAAATGGATTCAAGTTGTATTTGAGCCACCTGAACTGAGGCTTGGTGCATTAGAATTCCAGTATGGGGGTGAGAGTGAGGTGAAGCTGGAGATAACATATATAGATGACAGAGTCAGGTTGGGGAAGGGTTCCAGAGGTTCTCTATTTGTCTTTGAAAGACTCAGAAAAACTGTATAA 717 0.4589 MASSAVLFSSVRACEFSKPQTLIPRSNSPLIVSIPLHRRRHKNGRVFASISVTSPEVRTGPDDLVASILSKVAQTDRGVLLTKDKHKEVAEVAQELQKYCVTEPVKCPLIFGEWDVVYCSNPTSPGGGYRNAFGRLFFKAKEMIQVVEAPDIVRNKVHFSALGFLDVEVSLKGKLKALDDKWIQVVFEPPELRLGALEFQYGGESEVKLEITYIDDRVRLGKGSRGSLFVFERLRKTV* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0248 238 Pfam PAP_fibrillin 66 189 IPR006843 -
Vvi4g0248 238 Pfam PAP_fibrillin 204 231 IPR006843 -
Vvi4g0248 238 PANTHER PLASTID-LIPID-ASSOCIATED PROTEIN 4, CHLOROPLASTIC-RELATED 21 233 IPR039633 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0248 - - vvi:100250934 473.011