Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0247 ATGCTGATAATGTCTGGGTCACGCCAGCGCCCACATTTAAAGAGGCCAATATGGATAATTGTGTTGGTTTCATTGGTGAGCATTTGTCTGATTGGAGCCTATATTTACCCACCTAGAAGCTCGGCAGCCTGCTATATCTTTTCTTCCAGGGATTGTTCCATCTACGAGCAGCCTATCCATGTTCCTTCCAGAGAATTGACCGATGATGAGACTGCAGCTCAGGTTGTAATTAGGGAAATTTTGAAGACCCCTCCTGTTCACTCAAAGAACCCAAAAATTGCTTTCATGTTTTTGACCCCAGGATCATTACCCTTCGAAAAGCTGTGGGATAGGTTCTTTCATGGCCACGAGGACAGATTCACTGTCTATGTACATGCATCCAGTGAAAAGCCAGCACATGTGAGTCGTTATTTTATTGGGCGAGATATTCGCAGTGAGAAGGTGATTTGGGGCAAAATTTCCATGGTTGATGCAGAGAAGAGACTTTTAGGACATGCTCTAGAAGACCCCAACAACCAGCACTTTGTCCTGCTATCTGATAGTTGTGTCCCCCTGCATAACTTTGATTATGTGTATAACTATCTGATGTTTACAAACATCAGTTATATTGACTGTTTTGAAGATCCTGGTCCACATGGAAATGGCAGGTATTCAGATCATATGATGCCTGAAGTTGAAGTTAAGGACTTCAGGAAGGGTGCACAGTGGTTCTCCATGAAGCGGCAGCATGCTATAATAGTTATGGCAGACAGTCTCTACTACACTAAATTCAAGCTTTACTGCAGGCCAGGTATGGATGGGCGGAATTGCTATGCAGATGAACATTACTTGCCAACCCTTTTCAATATGATCGATCCTACTGGAATTGCAAACTGGTCTGTGACACATGTAGATTGGTCAGAAGGAAAGTGGCATCCAAAAGCATACAGGGGTCAAGACGTCAGTTACGAGCTCCTTAGGAATATTACAGCTATTGATATGAGCTATCATGTCACAAGCAATGAAAAGAAAAAAATGATGATTCAACCTTGTTTATGGAACGGAGTGAAGCGGCCTTGTTATTTGTTCGCAAGGAAATTTTACCCAGAAGCTCAGGATAACTTGCTGCATCTCTTTTCCAATTATACAACAGTTTAA 1137 0.4248 MLIMSGSRQRPHLKRPIWIIVLVSLVSICLIGAYIYPPRSSAACYIFSSRDCSIYEQPIHVPSRELTDDETAAQVVIREILKTPPVHSKNPKIAFMFLTPGSLPFEKLWDRFFHGHEDRFTVYVHASSEKPAHVSRYFIGRDIRSEKVIWGKISMVDAEKRLLGHALEDPNNQHFVLLSDSCVPLHNFDYVYNYLMFTNISYIDCFEDPGPHGNGRYSDHMMPEVEVKDFRKGAQWFSMKRQHAIIVMADSLYYTKFKLYCRPGMDGRNCYADEHYLPTLFNMIDPTGIANWSVTHVDWSEGKWHPKAYRGQDVSYELLRNITAIDMSYHVTSNEKKKMMIQPCLWNGVKRPCYLFARKFYPEAQDNLLHLFSNYTTV* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0247 378 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 30 369 IPR044174 GO:0016757
Vvi4g0247 378 Pfam Core-2/I-Branching enzyme 93 322 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0247 Vvi-Chr4 2154848 2162695 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0247 - - vvi:100257774 790.03