Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0246 ATGCTGCTGTTTCGCAGAATGTTGGTGGGAGTTAGCGATGGACGGTTTTTCCTGGGCAGCTTCCACTGTATGGACAAGCAAGGGAACATCATTCTCCAAGATACAGTGGAGTACCGTAGCACTCGACGCTCCTCTCCTTCCCCAATGGAGCAACGCTGCCTTGGTCTCATTCTCATCCCATTCTCATGTAGAACCTCTTGTCATGTAGATTGTTCCATTGAAGAACAATTGTCACTGTTGTCACTTCCTGGGTAG 255 0.4863 MLLFRRMLVGVSDGRFFLGSFHCMDKQGNIILQDTVEYRSTRRSSPSPMEQRCLGLILIPFSCRTSCHVDCSIEEQLSLLSLPG* 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0246 84 Pfam LSM domain 5 59 IPR001163 -
Vvi4g0246 84 Gene3D - 1 74 - -
Vvi4g0246 84 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN-ASSOCIATED PROTEIN B AND N 2 76 - -
Vvi4g0246 84 CDD LSMD1 2 70 IPR034110 GO:0031417
Vvi4g0246 84 SUPERFAMILY Sm-like ribonucleoproteins 4 73 IPR010920 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0246 - - vvi:100262900 174.096