Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0240 ATGGCTTCCATCTCCACCATTTCCACCTCCAATTTCTTCTGCAACAACCACTACACTGCAAAATTTTCTTCCACATCTTCGGTTCTTCAACCAAGACTCAGAATTTCAGCAGCAAATGCCGCCGTTTCAACTTCCTCCAATTATACAAGTAGGAGAACGAGTAGCGAGAGGGCGAATTTGGAGGTAGGCAGCTCGAGTAGTGCGATGGAGCAGCTGGACATCGAGCGCGGAGTTTGCTTTCCGTTCCGCAAGTACACTCCCGAGACAGTGAGGAATAAGGTGTTGGAATCTAGAGGGCAGATTCTGTCTCTGGTTGGGCGCGGTGTGGAGATAGTTTGGAATTTGGGGCTGTACTGGTCGACTTTGATGTATGATTGCTTGGTGGGGCGGGACGAAGAGGTTGTTCCTTATCGAGCTCGGCAGCTGAGGAATCTGCTGTGTGATTTAGGGCCTTCCTTTATCAAAGCCGGACAGGTTCTTGCTAACAGACCGGATATTATTAGGGAAGACTATATGAATGAACTCTGCATTCTTCAAGATGATGTTCCCCCTTTTCCTAATCAGGTTGCTTTCGCCATTATTGAAGAGGAATTAGGCCAACCCCTTGAAGCAATTTTCAGCAAAATTTCTTCTCAGACTATAGCAGCTGCAAGTTTGGGTCAGGTTTACCGAGCTACTTTGCGTGACTCAGGGGAGGATGTCGCTATTAAGGTGCAAAGGCCAAGGATAGAGCCTATAATCTATCGGGATCTCTTTCTCTTCCGTACTCTCGCTTCATTCTTGAATGGCATCAGTCTGCAGAAACTGGGATGCAATGCTGAACTGATCGTGGATGAATTTGGTGAGAAGCTTTTGGAGGAGCTTGATTACACCTTGGAAGCTCGTAATCTTGAAGATTTTCTGGAGAACTTTAAAAATGATCCTACTGTCAAAATCCCCCGGGTTTACAAAAAGCTTTCTGGTTCACGTGTTTTAGTCATGGAATGGATTGATGGTATTCGGTGCACTGATCCACAGGCTATTAAGGAAGCGGGTATTGATGTAAATGGATTTTTGACAGTTGGAGTGAGTGCTGCTTTGCGACAATTGCTAGAATTTGGGTTATTCCATGGAGACCCACATCCTGGAAATATTTTTGCTATGCGTGATGGACGTATTGCGTATGTGGACTTTGGTAATGTTGCTGTGCTCAGTCAGCAAAATAAACAGATTTTGATAGATGCGGTTGTCCATGCTGTAAATGAGGACTATGTTGAGATGGCAAATGATTTTACTAGGCTTGGTTTCCTTGCTAGTGGGACTGATGTTGCCCCCATTATTCCAGCACTAGAAGCAATTTGGCAGAACTCATCTGGAAAAGGACTCTCTGACTTTAATTTCCGAAGTGTTACTGGGAAGTTCAATCAATTGGTTTACCAATATCCCATTCGTATACCAGAGAGGTTTTCTCTCGTCATCCGTTCTTTGTTGACTCAAGAGGGCATCTGTTTTACACTGAAACCAGATTTCAAATTTCTTGAGGTTGCCTATCCATATGTGGCAAAGCGCCTTTTAACAGACCCAAATCCTGCTCTACGTGAACGCCTCATACAGGTTCTTTTCAAAGATGGTGTTTTCCAGTGGAAACGCCTTGAAAACCTTATTGTTCTAGCAAAGGAAAATGTGGCCAAGATGAGCAGCAACCCTGCATTAAAAGTGAAGCACACAAAAAGCTCCAGAGACCTGCAAGTTGAAAGGAAACTGGACCTCACAGATACGATCAAGGATGGAGCTCGCCTTTTCCTGATCGACGAAGGAATCCGCCGCCAGCTTCTCCTTGCCTTGACTGAAGATTCCAAGCTTCACATCCAAGAGCTTGTTGATGTGTATAGATTGGTGGAAGGAGACATAGACATACCCTCAGTTGCTCTGGAAGTAGCAAGAGACTTGCCTGCTGTTGCCCGCGATGTCATGCTTTCATGGAGTGCATCAGTCTTATCAGACAGATGA 1989 0.4505 MASISTISTSNFFCNNHYTAKFSSTSSVLQPRLRISAANAAVSTSSNYTSRRTSSERANLEVGSSSSAMEQLDIERGVCFPFRKYTPETVRNKVLESRGQILSLVGRGVEIVWNLGLYWSTLMYDCLVGRDEEVVPYRARQLRNLLCDLGPSFIKAGQVLANRPDIIREDYMNELCILQDDVPPFPNQVAFAIIEEELGQPLEAIFSKISSQTIAAASLGQVYRATLRDSGEDVAIKVQRPRIEPIIYRDLFLFRTLASFLNGISLQKLGCNAELIVDEFGEKLLEELDYTLEARNLEDFLENFKNDPTVKIPRVYKKLSGSRVLVMEWIDGIRCTDPQAIKEAGIDVNGFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAVLSQQNKQILIDAVVHAVNEDYVEMANDFTRLGFLASGTDVAPIIPALEAIWQNSSGKGLSDFNFRSVTGKFNQLVYQYPIRIPERFSLVIRSLLTQEGICFTLKPDFKFLEVAYPYVAKRLLTDPNPALRERLIQVLFKDGVFQWKRLENLIVLAKENVAKMSSNPALKVKHTKSSRDLQVERKLDLTDTIKDGARLFLIDEGIRRQLLLALTEDSKLHIQELVDVYRLVEGDIDIPSVALEVARDLPAVARDVMLSWSASVLSDR* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0240 662 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 71 623 - -
Vvi4g0240 662 CDD ABC1_ADCK3-like 178 424 - -
Vvi4g0240 662 SUPERFAMILY Protein kinase-like (PK-like) 179 411 IPR011009 -
Vvi4g0240 662 Gene3D Transferase(Phosphotransferase) domain 1 207 406 - -
Vvi4g0240 662 ProSiteProfiles Protein kinase domain profile. 208 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi4g0240 662 Pfam ABC1 atypical kinase-like domain 178 422 IPR004147 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0240 Vvi-Chr4 2105229 2112611 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0240 - - vvi:100244035 1285.01