Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0239 ATGGCTTTTGAATATTTTTTTGGAACGCTGGATCACCCCAAAACTTTCAACATGGACAATGTTCAGTTGGACACCAATTGGGAAGATGTGACTTGTCCTATATGTTTGGATTTCCCTCATAATGGTGTACTTCTCCAATGCTCATCTTATGAGAAAGGATGCCGTCCTTTTGTTTGTGACACAGACCACTTGCACTCGAATTGTCTTGAACGATTCAAAAGTGCATATGGGATGTCATCTGAGTTGAAATCCCCTTCAACATCTGATGCTGATGCTGATGCTGCTGCTGCTGCTTCCGCAGAAAACATCCAACAGTTGTCTGAAGACAGCTGCAGACCAACTTGCCCCTTGTGTAGAGGGGAAGTTACTGGGTGGATTGTTGTTGATAAGGCCCGGGAACAACTGGATGAGAAAAAGCGTTGTTGTGCAGAGGAACGATGTGCATTTATGGGAACTTATTTGGAACTTCGGAACCATGCTCAATTGGAGCATCCTCATGCTCGTCCATCAAAAATTGATCCTGCAAGGCAGCTTGACTGGGAGAATTTCCAGCAATCCTCTGAAATCATAGATGTTTTGAGCACCATTCATTCAGAAGTCCCTCGTGGTGTGGTTTTGGGAGACTATGTGATTGAATATGGGGATGATGAAACTGGAGATGAATTTGAGGACTTTCCTGGGGATGAAGGCAACTGGTGGACATCCTGTATTTTGTATCAGGTATTTGATAATTTTAGGGCTTCTAGAAACAGAAGAAGGGCAAGAGTCAGTGATGCCAGAAGAGGGAGTCGGCGTTCAAGTTATGACACTTCAAATTCTGATGAGGGTTCTGTGACATCTGTTGAATTTCCAGAGTATAGAGCCGATGAGACCGATGATGAGTTAGTGAGTACAAGTAGTGGATCGAGGGGCAGCACTGGACATCGCAGTTCTCGAAGACGCCGTTCTCGCTTCTATGACAATTAG 966 0.4451 MAFEYFFGTLDHPKTFNMDNVQLDTNWEDVTCPICLDFPHNGVLLQCSSYEKGCRPFVCDTDHLHSNCLERFKSAYGMSSELKSPSTSDADADAAAAASAENIQQLSEDSCRPTCPLCRGEVTGWIVVDKAREQLDEKKRCCAEERCAFMGTYLELRNHAQLEHPHARPSKIDPARQLDWENFQQSSEIIDVLSTIHSEVPRGVVLGDYVIEYGDDETGDEFEDFPGDEGNWWTSCILYQVFDNFRASRNRRRARVSDARRGSRRSSYDTSNSDEGSVTSVEFPEYRADETDDELVSTSSGSRGSTGHRSSRRRRSRFYDN* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0239 321 PANTHER OS01G0612600 PROTEIN 17 314 - -
Vvi4g0239 321 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 14 140 IPR013083 -
Vvi4g0239 321 Pfam Protein of unknown function (DUF1644) 28 194 IPR012866 -
Vvi4g0239 321 MobiDBLite consensus disorder prediction 253 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0239 Vvi-Chr4 2099214 2100866 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0239 - - vvi:100250872 553.903