Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0226 ATGCAACCGCAGCAGAGCTCGCGGATTGATGTGGCAGATTTGAAGGTTCAGATAGTGAAGAAAATTGGGGCTGACAGGGCAAGACGGTATTTTTATTACCTAAATAGGTTGTTGAGCCAGAAACTGTGTAAGAGTGAGTTTGATAAGTTGTGTTCTCGAGTACTTGGGAGAGAGAACGTGTTGCTGCACAATCAGTTTATTCGATCTATCTTAAAGAATGCCTTTCATGCTAAAACCCCACCGCCATTTCATGCTAAAACCCCACCGCCATTTCATGATGCGGGGCCCACAAATTCTGTTGAAGAAGATGGGCATGAACAAAGCAGGGCTGTCATTGCAAATCCAACTCCAAATTCGCCAATTTGGTCGAATGGAGCTGTTCCATCGTGGAAGAGTAGGCCTGTTATCCGTGATCGGAAGCCTCGGGACCGCCCTAGTCCTCTTGGACCAAATGGGAAGGTAGATTATGGGCCTCAATGGGCACCTGTAGAAGATAGTGGTAGTAAAGTTCTTACTGAAAATGGGGAGTTGACTCCTTGTGATTACCAGAGGCCAGTGCAGCCACTTCAAGGAGTTGCTGAGCTACCTGAGAATCAAAGGCAGGTTTCTGCTCAGCGACCCAAGGGGACTCCGAGACATAGCCAAGATCATACAGGATTAGCGGTTGTTGAAGATGGGGAAGAGGTGGAGCAAGCCAGCCACTTGAAATTCTCGAGAAGTCGTCTTATTGCTCCTCTTGGGATACCATTTTGCTCAGCTAGTATAGGTGGGGCCCGGAAAGCTTTGTCAGTGCCAAGCAATGATAATATGGTTAGCTATTTTGACAGTGGTGGGTTGTTCGATACAGAGATCCTGAGGAAACGGATGGAGCAGATTGCTGGAGGACAGGGCCTTGGGGGTGTTTCAATGGAATGTGCTAATATGCTAAATAATATGTTGGATGTGTATTTGAAACGGTTAATCAAGTCGTGTGTTGAGTTGGTGGGAGCAAGGTCCAAAAATGAACCAAAAAAGCATCACCCTGTGAAGCAGTCAATTCAAAGTAAGATTGTCAACGGCATGTGGCCTAGTAACCACTTACATATGCAAAGTAGCAGTGGGCCCATCGAAGTTATTCAGGAACAGAGACCCCTTTGCTCAATATCTTTGCTTGATTTCAAGGTTGCAATGGAGCTAAATCCACAGCAACTTGGAGAAGACTGGCCATTGCTTCTGGAGAAAATTTGCATGCAGACGTTCGAGGAATAA 1248 0.4615 MQPQQSSRIDVADLKVQIVKKIGADRARRYFYYLNRLLSQKLCKSEFDKLCSRVLGRENVLLHNQFIRSILKNAFHAKTPPPFHAKTPPPFHDAGPTNSVEEDGHEQSRAVIANPTPNSPIWSNGAVPSWKSRPVIRDRKPRDRPSPLGPNGKVDYGPQWAPVEDSGSKVLTENGELTPCDYQRPVQPLQGVAELPENQRQVSAQRPKGTPRHSQDHTGLAVVEDGEEVEQASHLKFSRSRLIAPLGIPFCSASIGGARKALSVPSNDNMVSYFDSGGLFDTEILRKRMEQIAGGQGLGGVSMECANMLNNMLDVYLKRLIKSCVELVGARSKNEPKKHHPVKQSIQSKIVNGMWPSNHLHMQSSSGPIEVIQEQRPLCSISLLDFKVAMELNPQQLGEDWPLLLEKICMQTFEE* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0226 415 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 4 328 IPR024738 GO:0070461
Vvi4g0226 415 PANTHER TRANSCRIPTIONAL ADAPTER 1 1 414 IPR024738 GO:0070461
Vvi4g0226 415 MobiDBLite consensus disorder prediction 111 126 - -
Vvi4g0226 415 MobiDBLite consensus disorder prediction 79 219 - -
Vvi4g0226 415 MobiDBLite consensus disorder prediction 194 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0226 Vvi-Chr4 1981157 1982404 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0226 - - vvi:100852560 841.647