Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0223 ATGGTGCGTTTGAGATCTTCATCGAATTCGCAAGAGAATGATGGGAATTCGGATGAGTTGATTCCGGGCCTGCCGGAGGAGATCGCCGAGCTGTGTCTCCTCCATGTGCCGTACCCCTACCAAGCGCTGGCTCGGTCGGTGTCGTCTTCGTGGAACAAAGCCATTACAGATCCTTCGTTCCTTCTCTCGAAGAAAATTCTATCGCTGTCTCAGCCTTATCTCTTCGTTTTCGCTTCCAGCAAATCAACGTCCAGGATTCAGTGGCAAGCGCTGGACCCGCGATCGGGCCGTTGGTTTGTGCTACCGCCCATGCCGTGTTCCGCAGCTGCTTGTCCACCGGGGCTCGCCTGCGCCTCACTACCAGAAGATGGGAAGCTGTTTGTTTTGGGTGATTTGCGCTCAGACGGAACGTCCCTGCACACCACCATCATGTACCGTGCGTCCACCAATCAATGGTCGTTAGCGTCTCCGATGCGGACTCCACGGACGTTCTTCGCCGCCGGGAGCATCAACGGCAAGATTTTCGCCGCCGGCGGGAGGGGCCTGGGGGTCGAGGATTCGATACCCACCGTCGAACGCTACGACCCCGTGAGCGACACGTGGGCGGCAGTTGCTAAAATGCGCTCGGGTTTAGCAAGGTACGACGCCGCGGTTGTTGGAAACAAACTGTACGTGACAGAGGGTTGGACGTGGCCATTCAGCTTCTCGCCACGCGGCGGCGTGTACGACGGCGATCGTGACACGTGGCAGGAGATGAGCTTGGGGATGAGAGAAGGGTGGACGGGGATCAGCGTCGTCCTGAGGAACAGACTCTTCGTGTTATCCGAGTATGGCGACTGCCGGATGAAGGTGTACGTACCCGATCACGACACGTGGCACCCCGTGGGTGGGGGTAGGTTCCCCTGCGAGGCGCTGCAGAGGCCATTCGCCGTGAGCACAATGGAGGATAGGATCTACGTGGTGTCACGTGGGTTGCACGTGGCAGTGGGCAAAGTACATGAAACAGTAGAGGCTTCTCAATCCCACCATCTATGGGTGGAGTGGGAGGTAATGGCAGCTCCCATCGCCTTTTCAGACTTTTCTCCCTGTAATTGTATCGAATTAGATGTATAA 1113 0.5714 MVRLRSSSNSQENDGNSDELIPGLPEEIAELCLLHVPYPYQALARSVSSSWNKAITDPSFLLSKKILSLSQPYLFVFASSKSTSRIQWQALDPRSGRWFVLPPMPCSAAACPPGLACASLPEDGKLFVLGDLRSDGTSLHTTIMYRASTNQWSLASPMRTPRTFFAAGSINGKIFAAGGRGLGVEDSIPTVERYDPVSDTWAAVAKMRSGLARYDAAVVGNKLYVTEGWTWPFSFSPRGGVYDGDRDTWQEMSLGMREGWTGISVVLRNRLFVLSEYGDCRMKVYVPDHDTWHPVGGGRFPCEALQRPFAVSTMEDRIYVVSRGLHVAVGKVHETVEASQSHHLWVEWEVMAAPIAFSDFSPCNCIELDV* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0223 370 CDD F-box_AtAFR-like 20 60 - -
Vvi4g0223 370 Pfam F-box domain 23 61 IPR001810 GO:0005515
Vvi4g0223 370 MobiDBLite consensus disorder prediction 1 20 - -
Vvi4g0223 370 MobiDBLite consensus disorder prediction 1 17 - -
Vvi4g0223 370 Gene3D - 64 350 IPR015915 GO:0005515
Vvi4g0223 370 SMART fbox_2 24 64 IPR001810 GO:0005515
Vvi4g0223 370 SMART kelc_smart 173 221 IPR006652 GO:0005515
Vvi4g0223 370 SMART kelc_smart 125 172 IPR006652 GO:0005515
Vvi4g0223 370 PANTHER OS02G0202900 PROTEIN 7 366 IPR045887 -
Vvi4g0223 370 SUPERFAMILY F-box domain 20 77 IPR036047 GO:0005515
Vvi4g0223 370 Pfam Kelch motif 161 208 IPR006652 GO:0005515
Vvi4g0223 370 SUPERFAMILY Kelch motif 72 324 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0223 Vvi-Chr4 1954099 1957566 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0223 - - vvi:100264536 740.725