Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0218 ATGGTGAGTGACCCTAACATTTTCCCTTCGCCGCACATGGTGACGGGGTTCTCTCTCCGCCCGGTTACATCCTCCATTTCTCATTTTCCTCCAAAACATAGGGTTAGGTTTAGGGTTTCTGAGTCACTCTCTTTCCCAATTCGGACACCGAGTCGACTCAGTTCCAAGCAAATGAGCACCGAATCTGCCGCAGACTCAAATGCCATCGTCTCCAGCGACGGAAAAGCGGCAAACCCCGATATTCTGGTGCAGTACGTAGTTCTCCGGCGAGACCTGATCGAGAAGTGGCCGCTGGGGAGCATCGTCACGCAGGGCTGCCATGCTTCAGTGTGTGCGATTTGGGCTTACAAAGACGATCCCCACACGATCGAGTACTGCAGCCCGGAAAATATTGATTCAATGCATAAGGTAACCCTTGAAGTGAAGGGAGAAACCCAGATGGAGAACCTGGTGGAGAAGCTGAGAGCAGGTGGCATTGCTCACAAGCTGTGGATTGAACAACCTGAGAACATTCCCACTTGTCTTGCTACCAAGCCCTACCCCAAATCCATTGTATCGCCATTCTTCAGAAAGCTCAAGCTCTGCAAGTCATGA 594 0.5135 MVSDPNIFPSPHMVTGFSLRPVTSSISHFPPKHRVRFRVSESLSFPIRTPSRLSSKQMSTESAADSNAIVSSDGKAANPDILVQYVVLRRDLIEKWPLGSIVTQGCHASVCAIWAYKDDPHTIEYCSPENIDSMHKVTLEVKGETQMENLVEKLRAGGIAHKLWIEQPENIPTCLATKPYPKSIVSPFFRKLKLCKS* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0218 197 Gene3D Bit1 80 195 IPR023476 -
Vvi4g0218 197 PANTHER PEPTIDYL-TRNA HYDROLASE PTRHD1-RELATED 54 196 IPR042237 -
Vvi4g0218 197 Pfam Peptidyl-tRNA hydrolase PTH2 82 195 IPR002833 GO:0004045
Vvi4g0218 197 CDD PTH2_like 82 195 - -
Vvi4g0218 197 SUPERFAMILY Peptidyl-tRNA hydrolase II 82 195 IPR023476 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0218 K05969 - vvi:100264456 403.675