Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0215 ATGCTTTGGGTGAAGAGATTGGGGAATACTAAAGTGCATACAAGGTTTCTAACTGGCTTTTTGGAAAAATATAACCCTGAGAAGGTTTTGGATACTCCAATTACAGAGGCTGGCTTTACTGGGATTGGAGTTGGCGCCCAGCACTCCCAGTGTAATATAACTGGGTATGGCTCCTACTCTGGGTTGAAAGCGTTGTCCCCATATTCATCTGAGGATGCCCATGGATTGCTAAAAGTTGTTATGAGAGACCTTGATCCTGTTGTTTTCCTTGAAAATGAGTTGTTGTATGGTGAATCTTTCCTTGTCTCAGCAAAAGCTCTTGATTCCAGTAAGCTCTCAACTTATATTAATATCAGCTTAGAGCTTTTATTACATATTATAGTAATATATTTTATTTGA 399 0.3885 MLWVKRLGNTKVHTRFLTGFLEKYNPEKVLDTPITEAGFTGIGVGAQHSQCNITGYGSYSGLKALSPYSSEDAHGLLKVVMRDLDPVVFLENELLYGESFLVSAKALDSSKLSTYINISLELLLHIIVIYFI* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0215 132 PANTHER DEHYDROGENASE RELATED 43 112 IPR027110 GO:0004739|GO:0006086
Vvi4g0215 132 Gene3D - 5 43 - -
Vvi4g0215 132 Gene3D - 44 111 - -
Vvi4g0215 132 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 14 101 IPR029061 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0215 Vvi-Chr4 1897381 1899020 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0215 K00162 - cpap:110823011 128.642