Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0206 ATGCAATTGATTCATTTTAGGCGTAAAATGATGGCTTACAGAGTCATTGGAACTGTGATCGAGTTGAATTGTAGTAAATACGCATCTGGGTATAAAGAATCTTTGCAGCATACTCGATTGATGACCACGAGTAAGAGGGTTCAAGATAGAAGTACGCAGAAGAGGGTGCATGATCTTGAAATTGTGACGGAGAAGTGGAAGATAGTTTCCAAAGTTTTGTTCCTTATGGAGGTTTTGAAGAAGGAGGCTGAGCAGATTATCACAGTGAGGTCACTGGATCAGTATAGGAGGCAGGTTAATCTGCCAAAGCCCCATAAGATATCCGACTTTATTCGGAAATCTCCCAAATTGTTTGAGTTGTATAAGGATCAGAAAGGGGTGTTGTGGTGTGGGATGACCAAAGAAGGCGAGGATCTGGTGGCCGAGGAGGAGAGGCTTCTTGAGGAGCATGCTGATAAAGCCGCTGAGCATGTTACGAGGTTTTTAATGATGTCGATAGATAAGCGGCTTCCATTGGATAAGATTGCCCATTTCAGGAGAGATTTTGGTCTGCCATATGATTTTCGGACCAGTTGGGTGCGGAAGTATCCTCAACATTTTAGGGTAGTTAAGTCCGAGGATGAACTTGAGTATTTGGAACTTGTTTCTTGGAATCCTGCTTTGGCTGTGACAGAATTGGAGAAGAAGGCAAATGGGGCAAATGGAGATATTCTTCCCACACCGGGTCTGCTTTCCCTTCCTTTCCCCTTGAAATTTCCTCCTAACTACAAGAAGGTGTATAGGTATGGAGGAAAAATTGATCACTTTCAGAAACGGTCGTATTTGTCTCCATATGCAGATGCCCGTGGCATGAAAGCTGGGTCACGAGAATTTGATAAGAGGGCAGTGGCTATTATGCATGAGTTGCTTAGCTTTACTATTGAGAAGAGGTTGGTCACAGATCACCTTACCCACTTCCGTTGGGAACTTGTTATGCCTCAAAAGCTCATGAGACTTCTTCTGAAGCATTTTGGCATTTTCTATGTCTCTGAGAGGGGGAAGAGGTTTAGTGTGTTCTTGACTGAAGCCTATGAAGGTTCAGAGCTGATTGACAAATGCCCATTGGTTCTTTGGAAGGAAAAAGTCCAGAATCTTATTGGTTACAGAGGAAGGAAGCGCAGAATTGAAACTTTTGATGACTTGACAGATATGGCGGATACTAGTTTGTTTGAGATGGATTCTGAGAATGAAAATTTTGATGCAGAACTCGAGCAGGGTGAGACCATTGATGGTTTAGGCAATGGCTTACTTGCAGATGACGTTGAGATGGAGATTGGAGAGATTTGCAATGCATACAAGGATAATGAACCATCCTGA 1356 0.4307 MQLIHFRRKMMAYRVIGTVIELNCSKYASGYKESLQHTRLMTTSKRVQDRSTQKRVHDLEIVTEKWKIVSKVLFLMEVLKKEAEQIITVRSLDQYRRQVNLPKPHKISDFIRKSPKLFELYKDQKGVLWCGMTKEGEDLVAEEERLLEEHADKAAEHVTRFLMMSIDKRLPLDKIAHFRRDFGLPYDFRTSWVRKYPQHFRVVKSEDELEYLELVSWNPALAVTELEKKANGANGDILPTPGLLSLPFPLKFPPNYKKVYRYGGKIDHFQKRSYLSPYADARGMKAGSREFDKRAVAIMHELLSFTIEKRLVTDHLTHFRWELVMPQKLMRLLLKHFGIFYVSERGKRFSVFLTEAYEGSELIDKCPLVLWKEKVQNLIGYRGRKRRIETFDDLTDMADTSLFEMDSENENFDAELEQGETIDGLGNGLLADDVEMEIGEICNAYKDNEPS* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0206 451 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 38 401 IPR045040 GO:0003723
Vvi4g0206 451 Pfam Plant organelle RNA recognition domain 54 382 IPR021099 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0206 Vvi-Chr4 1818625 1819980 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0206 - - vvi:100855202 907.131