Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0195 ATGACGATGACGATGGCGACGGGGAATCTGGCGGCACACGATCGGCAGATTCTGCAGGCGGTGAATGGCGGAGCATCGAGTCTTTCGTTTGTCGGTTCAGGCTTCATCGTCCTCTGCTACCTTCTCTTCAAGGAGCTTCGAAAGTTCTCCTTCAAGCTCGTCTTCTACCTCGCTCTCTCTGACATGCTCTGTAGTTTCTTCAGCATTATTGGAGATCCATCCCAGGGATTTTTTTGCTATGCTCAGGGCTACACCACCCATTTCTTCTGTGTGGCGTCTTTCTTGTGGACTACTACTATTGCTTTCACTCTTCACCGCACTGTTGTTAGACACAAAACTGATGTTGAAGATTTGGAGTCCATGTTTCACTTGTATGTTTGGGGAACTTCACTAGTTATGACTGTGATACGATCTATTGGTAATGACCATGGCCATTTGGGTGTGTGGTGTTGGGAGCAAAGAGGTCAAACAGGAAAGGTGGTTCACTTTATAACATTTTATGTTCCCCTTTGGGGTGCTATTCTTTTCAATGGTTTTACATACTTTCAAGTGATACGCATGCTGAACAATGCAACCCGTATGGCTGTAGGCATGTCAGAGCGGGGATACCAATTGGATGCAAGGGCAGATAACATGAAGGCTTTAAATCGGTGGGGTTACTACCCGCTAATTTTAATAGGATCATGGGCTTTTGGCACCATCAACCGTGTCCATGATTTTATTGAACCAGGACATAAAATCTTTTGGCTCTCAGTTCTTGATGTGGGGATGGCTGCACTTATGGGATTATTCAACTCAATAGCATATGGCCTCAACTCCTCAGTGCGACGGGCAATTTATGAAAGATTGGATCTGTTTTGGCCTGAGAAGCTTCGGAGATGGTTCCCTTGCTCATCGAAGTCCAGAGGCCAGCAGCAGGAAAGCGAACTAGTCTCATTGAAAATCCAAGATCCTCAGTAG 960 0.4594 MTMTMATGNLAAHDRQILQAVNGGASSLSFVGSGFIVLCYLLFKELRKFSFKLVFYLALSDMLCSFFSIIGDPSQGFFCYAQGYTTHFFCVASFLWTTTIAFTLHRTVVRHKTDVEDLESMFHLYVWGTSLVMTVIRSIGNDHGHLGVWCWEQRGQTGKVVHFITFYVPLWGAILFNGFTYFQVIRMLNNATRMAVGMSERGYQLDARADNMKALNRWGYYPLILIGSWAFGTINRVHDFIEPGHKIFWLSVLDVGMAALMGLFNSIAYGLNSSVRRAIYERLDLFWPEKLRRWFPCSSKSRGQQQESELVSLKIQDPQ* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0195 319 SUPERFAMILY Family A G protein-coupled receptor-like 16 294 - -
Vvi4g0195 319 Pfam Slime mold cyclic AMP receptor 27 273 - -
Vvi4g0195 319 PANTHER G PROTEIN-COUPLED RECEPTOR 157-RELATED 6 278 - -
Vvi4g0195 319 ProSiteProfiles G-protein coupled receptors family 2 profile 2. 18 273 IPR017981 GO:0004888|GO:0007166|GO:0016020
Vvi4g0195 319 PRINTS Putative plant GPCR, GCR1, signature 35 49 IPR022340 -
Vvi4g0195 319 PRINTS Putative plant GPCR, GCR1, signature 245 262 IPR022340 -
Vvi4g0195 319 PRINTS Putative plant GPCR, GCR1, signature 119 134 IPR022340 -
Vvi4g0195 319 PRINTS Putative plant GPCR, GCR1, signature 18 33 IPR022340 -
Vvi4g0195 319 PRINTS Putative plant GPCR, GCR1, signature 51 73 IPR022340 -
Vvi4g0195 319 PRINTS Putative plant GPCR, GCR1, signature 96 114 IPR022340 -
Vvi4g0195 319 PRINTS Putative plant GPCR, GCR1, signature 263 279 IPR022340 -
Vvi4g0195 319 PRINTS Putative plant GPCR, GCR1, signature 81 94 IPR022340 -
Vvi4g0195 319 PRINTS Putative plant GPCR, GCR1, signature 158 170 IPR022340 -
Vvi4g0195 319 PRINTS Putative plant GPCR, GCR1, signature 171 194 IPR022340 -
Vvi4g0195 319 PRINTS Putative plant GPCR, GCR1, signature 215 236 IPR022340 -
Vvi4g0195 319 Gene3D - 8 296 - -
Vvi4g0195 319 PRINTS GCR1-cAMP receptor family signature 29 47 IPR022343 -
Vvi4g0195 319 PRINTS GCR1-cAMP receptor family signature 253 272 IPR022343 -
Vvi4g0195 319 PRINTS GCR1-cAMP receptor family signature 79 97 IPR022343 -
Vvi4g0195 319 PRINTS GCR1-cAMP receptor family signature 48 63 IPR022343 -
Vvi4g0195 319 PRINTS GCR1-cAMP receptor family signature 221 239 IPR022343 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0195 K22987 - vvi:100250714 660.988