Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0159 ATGAACAAGTGGGAAAAATCATTGAGAGAAGATAAATCCAGTCACGAGAGGAAGAATCCATCTTTCTCTTCGAGTCTTCTGGATGAAATTTATCGTTCGATTACCGATGGTGACGAGGATCACAAAGAACTGCATTTTTACAGAGAAACAATGGCGAAGAAGCATAGTTTGAGAGGCAGCAGAGGCGTTGGAGAGGAGGAAATGGCGAGGGTTCGTGGAGCGGGCGTGACGGACAAATGGATGGAGAAGAAAGGTAGTGAGAAGGTTGTTTCGCGACATCAACGGCGGTCGTTGCCGGAAATTGATAAAAAATGGCAGTACTATCAGGATCCTCTGTTCTTCAGCTCGAGTTCTAGCTCTTCTGATTCCAGTTATGGAGGATTTTCGTCGTCGGAGACGGAATCGATGAAGTCCTTCTTCGCTCCGCCACCAAGGCCTAGACCGATTCGAACCTCTCGTTTGGAGAGGTCGGAGCAGGCTTTGTCCTATGGACAGAGCGAATTTCACATGTTTGATGACTATCGCCATCACTCTGCGATCACAAGAGAACCGTCAAAGAGCGAAGAAGAGATTATCAAGTCGAAATCGAGAGCTTTGAAGATGTATGGCAACCTCAAGAAGGTGAAGCAGCCAATCTCACCGGGAGGCCGACTCGCGACGTTTCTTAATTCACTTTTCACTGCAGGAAACACTAAGAAGTCGACGAAGACCACATCATCAGCTGGAGGTTGCGAGGATTGGAGTTCCGAGAGGAAGCTTAATTCGCAGCCATCAACTTGTTCTTCAGCCTCCTCATTTGCAAGATCATGTTTAAACAAGAATTCTCCTTCCGTAAAGGAGAAATCCCGCAATGACGCGAAGAGGACAGTCAGATTCTTCCCGGTTAGCATTATTGTGGACGAAGACTGTCGGCCATGTGGCCGTAAATGCGTTTATGGAGAAGAAGGCTCAACTCAAATGTCGGCATCCAGAAAAATTACCAAAAGAAATGAAGAAGACCTCAAATTCCAGGACCAAACCAGACGAGTCGAAGCAGCTGCCAGAGAATTACACAGAAACTTTCATCAGAAGAAAAACGATAACATTTTCAATAAATTTCATGTCAATTATGACGAAGAAGACGAAGATGATGATGCTGCAAGTTGTTCAAGCTCTGATCTATTCGAGCTCGATCACCTCGCATTAATCGGTAATGACAGGTATCAAGAAGAGCTTCCAGTGTATGAAACCACTCATATAGATACTAATCGCGCCATAGCTAATGGCTTGCTTGTGTAG 1278 0.4538 MNKWEKSLREDKSSHERKNPSFSSSLLDEIYRSITDGDEDHKELHFYRETMAKKHSLRGSRGVGEEEMARVRGAGVTDKWMEKKGSEKVVSRHQRRSLPEIDKKWQYYQDPLFFSSSSSSSDSSYGGFSSSETESMKSFFAPPPRPRPIRTSRLERSEQALSYGQSEFHMFDDYRHHSAITREPSKSEEEIIKSKSRALKMYGNLKKVKQPISPGGRLATFLNSLFTAGNTKKSTKTTSSAGGCEDWSSERKLNSQPSTCSSASSFARSCLNKNSPSVKEKSRNDAKRTVRFFPVSIIVDEDCRPCGRKCVYGEEGSTQMSASRKITKRNEEDLKFQDQTRRVEAAARELHRNFHQKKNDNIFNKFHVNYDEEDEDDDAASCSSSDLFELDHLALIGNDRYQEELPVYETTHIDTNRAIANGLLV* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0159 425 MobiDBLite consensus disorder prediction 54 96 - -
Vvi4g0159 425 MobiDBLite consensus disorder prediction 1 18 - -
Vvi4g0159 425 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 1 424 IPR039621 GO:0009734
Vvi4g0159 425 MobiDBLite consensus disorder prediction 114 137 - -
Vvi4g0159 425 MobiDBLite consensus disorder prediction 114 153 - -
Vvi4g0159 425 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0159 Vvi-Chr4 1328367 1329644 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0159 - - vvi:100255952 784.637