Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0131 ATGGCAGTTACGCAGTTCGAACCAGCTGATGCCAGGCGATGCTTTCCATGCTGGGATGAGCCTGCTTGCAAGGCTACATTCAAGATCACATTAGATGTGCCATCTGACCTCATAGCTCTTTCAAATATGCCTGTCATAGAAGAAAAACCGAATGGGCATCTCAAGACAGTTTCCTATCAAGAATCGCCAATTATGTCTACATATTTGGTGGCAGTTGTCATTGGTCTGTTTGATTATGTGGAAGATCATACACCTGATGGGATCAAAGTTCGTGTCTACTGTCAAGTTGGTAAGGCAGATCAAGGGAAATTTGCTTTGGATGTGGCTGTCAAGACACTTGGCTTATACAAAGAATACTTTGCTTGTCCATACTCACTACCCAAATTGGACATGATTGCAATCCCCGATTTTGCTGCTGGGGCAATGGAAAACTACGGTTTAGTTACATATCGTGAAACAGCTTTGCTTTATGATGAGAAACATTCTGCAGCTGCTAACAAGCAGAGGGTTGCTACTGTTGTAGCCCATGAACTGGCGCACCAGTGGTTTGGCAATCTTGTAACAATGGAGTGGTGGACACATTTATGGCTGAACGAAGGATTTGCAACATGGGTGAGCTATTTAGCAGCTGATAGCTTGTTTCCAGAATGGAAAGTTTGGACTCAGTTTCTTGATGAAAGTACTGAGGGTCTTAGGTTGGATGGGCTAGCAGAGTCACATCCCATTGAGGTGGAGATAAATCATGCTGGTGAGATTGATGAAATATTTGATGCAATAAGTTACAGAAAAGGTGCATCTGTTATCAGGATGCTGCAGAGCTATCTTGGTGCTGAATGTTTTCAGAGGTCACTTGCTTCATACATAAAAAAGCATGCTTGCTCAAATGCAAAGACGGAAGACTTATGGGCTGCCCTTGAGGAGGGATCTGGTGAACCTGTGAACAGGCTAATGAATTCATGGACAAAACAAAAAGGATATCCAGTTGTCTCTGTCAAAATCAATAATCAGAAATTGGAGTTTGAGCAGACACAGTTCTTGTCAAGTGGTTCCCAAGGGGATGGGCAATGGATTGTCCCAATAACATTATGCTGTGGCTCATATGATACTCCCCATAATTTCCTATTGCAAACAAAATCCGAAAGTCTTGATATGAAGGAATTCCTGGGCTGCTGTGTTGGAGGGGGAAACGATAATAGCATTGCAGTGTGTTCTTGGATAAAACTTAATGTGGACCAGACTGGTTTCTATAGGGTGAAATATGATGAGAAGCTTGCAGCTGGACTTAGATCTGCAATCGAGAAAAATTACTTGTCTGCAACAGATAGATTTGGTATTTTGGATGATTCATTTGCCCTTTGTATGGCATGCCAGCAGTCTTTGACCTCTTTGCTTACCTTGATGGGAGCTTACAGGGAGGAACTTGATTATACTGTGCTGTCTAATTTGATTAGTATAAGTTACAAAGTTGCAAGAATTGCGGCTGATGCAACTCCTGAATTAGTAGACTACATCAAAGAATTTTTCATTAGCCTTTTCCAGTATTCTGCAGAGAAACTTGGTTGGGAGCCAAGACCAGGTGAGGGCCACTTAGATGCAATGTTGAGAGGGGAAGTTTTGACTGCCCTTGCTGTTTTTGGGCATGATTTGACGATAAATGAAGCAAGTAGGCGTTTTCATGCATTCTTGGATGACAGAAATACTCCAGTCCTCCCTCCTGATATAAGAAAGGCAGCCTATGTTGCTGTGATGCAGAATGTCACGACCTCAAACAGATCAGGCTATGAATCTCTTCTGAGAGTTTATAGAGAGACTGATCTAAGCCAGGAAAAAACACGCATTTTAGGTTCTTTGGCTTCTTGTCCAGACCCTAATATTGTTCTTGAAGTTCTCAACTTTGTGTTGTCTTCTGAGGTTCGAAGTCAAGATGCTGTTTTCGGACTTGCTGTTAGTAGGGAAGGACGTGAAACAGCTTGGTCATGGCTAAAGAACAACTGGGATTACATCTCAAAAACATGGGGATCTGGATTTCTTATAACCCGCTTCGTCAGTGCAATCGTCTCCCCGTTTGCTTCATTTGAGAAGGCCAGTGAAGTACAGGAGTTCTTCGCAACCCGAACCAAGCCCTCAATTGCTAGAACCTTGAAGCAGAGCATTGAACGGGTTCATATTAATGCAAAATGGGTTGAGAGTATTCAGAATGAGAAACATCTTGCAGATGCTATGAAGGAGTTGGCATACCGGAAATACTAG 2250 0.4262 MAVTQFEPADARRCFPCWDEPACKATFKITLDVPSDLIALSNMPVIEEKPNGHLKTVSYQESPIMSTYLVAVVIGLFDYVEDHTPDGIKVRVYCQVGKADQGKFALDVAVKTLGLYKEYFACPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDEKHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKVWTQFLDESTEGLRLDGLAESHPIEVEINHAGEIDEIFDAISYRKGASVIRMLQSYLGAECFQRSLASYIKKHACSNAKTEDLWAALEEGSGEPVNRLMNSWTKQKGYPVVSVKINNQKLEFEQTQFLSSGSQGDGQWIVPITLCCGSYDTPHNFLLQTKSESLDMKEFLGCCVGGGNDNSIAVCSWIKLNVDQTGFYRVKYDEKLAAGLRSAIEKNYLSATDRFGILDDSFALCMACQQSLTSLLTLMGAYREELDYTVLSNLISISYKVARIAADATPELVDYIKEFFISLFQYSAEKLGWEPRPGEGHLDAMLRGEVLTALAVFGHDLTINEASRRFHAFLDDRNTPVLPPDIRKAAYVAVMQNVTTSNRSGYESLLRVYRETDLSQEKTRILGSLASCPDPNIVLEVLNFVLSSEVRSQDAVFGLAVSREGRETAWSWLKNNWDYISKTWGSGFLITRFVSAIVSPFASFEKASEVQEFFATRTKPSIARTLKQSIERVHINAKWVESIQNEKHLADAMKELAYRKY* 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0131 749 Gene3D Neutral Protease Domain 2 78 325 IPR027268 -
Vvi4g0131 749 PANTHER PROTEASE M1 ZINC METALLOPROTEASE 1 730 - -
Vvi4g0131 749 Gene3D tricorn interacting facor f3 domain 1 77 IPR042097 -
Vvi4g0131 749 Pfam ERAP1-like C-terminal domain 405 722 IPR024571 -
Vvi4g0131 749 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 84 331 - -
Vvi4g0131 749 Pfam Peptidase M1 N-terminal domain 1 69 IPR045357 -
Vvi4g0131 749 FunFam Aminopeptidase 326 420 - -
Vvi4g0131 749 FunFam Aminopeptidase 423 741 - -
Vvi4g0131 749 Pfam Peptidase family M1 domain 104 320 IPR014782 GO:0008237|GO:0008270
Vvi4g0131 749 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 1 75 IPR042097 -
Vvi4g0131 749 Gene3D - 422 737 - -
Vvi4g0131 749 CDD M1_APN-Q_like 1 322 IPR034016 -
Vvi4g0131 749 FunFam Aminopeptidase 79 325 - -
Vvi4g0131 749 PRINTS Membrane alanyl dipeptidase (M1) family signature 137 147 IPR001930 GO:0006508
Vvi4g0131 749 PRINTS Membrane alanyl dipeptidase (M1) family signature 192 204 IPR001930 GO:0006508
Vvi4g0131 749 PRINTS Membrane alanyl dipeptidase (M1) family signature 12 27 IPR001930 GO:0006508
Vvi4g0131 749 PRINTS Membrane alanyl dipeptidase (M1) family signature 173 188 IPR001930 GO:0006508
Vvi4g0131 749 PRINTS Membrane alanyl dipeptidase (M1) family signature 59 74 IPR001930 GO:0006508
Vvi4g0131 749 Gene3D - 326 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0131 Vvi-Chr4 1184535 1191818 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0131 K08776 - vvi:100264544 1515.75