Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0126 ATGAATGATAGTACCAGTAATAGGAAGAAAAGGAGGAGGAAGGATGAGGGTGAAGGGGAGTTGGGTGTGGTGAAGGAGGGGAAGAAGAGGGACTTGAAGGAGATTATCACCTCTTTACTGCTGTTGGAAGAGCAGCAGAAGCGTGATCAGGAGGAGTTCGACAGGACTCTGGAGGAGGAGAAGATGGTGTTTGAAGAGAATCATAAGAAGAAGACCAGAGCCATGATGGACTACTATTCAAATCTCCAGGACTACTACAATGAATTGGATGATATGGATCAAGCTAGGAGGAAACGCTGCAATTCAGCCTCTGCCACCACTGCCGCTGCCGCCGGTGCTGCCGGAGCCGCTTCTCTTGAGTTTTCAGACAGTTCAGTCAAGCCTGGGAGTGGTGCAAGAAGGTTATGGGTGAAGGACAGGTCCAAAGCTTGGTGGGATGAATGCAACAAGCCAGAGTTTCCAGAGGAGGAGTTCAGAAAGGCCTTTAGGATGAGCAGAGCAACATTTGATATGATATGTGATGAGCTCAATTCAGTGGTTGCAAAGGAGGATACCATGTTGAGAGCTGCAATTCCTGTGAGGCAAAGAGTGGCTGTTTGTATATGGAGGTTAGCGACTGGTGAGCCTCTAAGGCTTGTGTCAAAGAAGTTCGGTTTAGGTATATCCACTTGCCATAAGCTTGTTCTTGAGGTTTGTTCTGCTATAAGGACTGTTTTGATGCCCAAGTATCTGCAGTGGCCAGATGAGGAGACATTGAGGAGGATGAAGGATGAGTTTGAATCAATTTCAGGGATACCCAATGTTGTTGGCTCTATGTATACCACCCATATCCCAATCATAGCCCCAAAGATCAGTGTGGCAGCCTATTTCAATAGGAGGCATACAGAGAGGAACCAGAAGACTTCTTACTCCATTACAGTTCAGGGTGTTGTTGATCCAAAAGGGGTGTTTACTGATGTATGCATTGGGTGGCCTGGTTCCATGCCTGATGATCAGGTGTTGGAGAAATCTGCCCTTTATCAGAGGGCTAATGGGGGGCTTTTGAAGGGCGTTTGGATTGTTGGAGGTTCAGGGTACCCTCTAATGGATTGGGTGATGGTGCCTTACACTCAGCAGAATCTCACCTGGACACAGCATGCATTCAATGAGAAAATTGGGGAGATTCAGAGGGTTTCTAGGGAGGCATTTGCGCGGTTGAAAGCGCGGTGGTGTTGTCTGCAGAAGAGAACAGAGGTGAAACTCCAGGACCTCCCTGTGGTTCTTGGGGCCTGCTGTGTGTTACATAACATTTGTGAATTGCAGAACGAAGAAATGGACCCAGAACTCAGGATCAATCTCATTGATGACGAGATGATCCCAGAGATTCCATTGAGATCAACAACCTCAATGAAGGCCAGAGATGCAATTGCCCACAATCTTCTCCACCATGGCCTTGCAGGCACTGCATTCCTATAG 1455 0.4763 MNDSTSNRKKRRRKDEGEGELGVVKEGKKRDLKEIITSLLLLEEQQKRDQEEFDRTLEEEKMVFEENHKKKTRAMMDYYSNLQDYYNELDDMDQARRKRCNSASATTAAAAGAAGAASLEFSDSSVKPGSGARRLWVKDRSKAWWDECNKPEFPEEEFRKAFRMSRATFDMICDELNSVVAKEDTMLRAAIPVRQRVAVCIWRLATGEPLRLVSKKFGLGISTCHKLVLEVCSAIRTVLMPKYLQWPDEETLRRMKDEFESISGIPNVVGSMYTTHIPIIAPKISVAAYFNRRHTERNQKTSYSITVQGVVDPKGVFTDVCIGWPGSMPDDQVLEKSALYQRANGGLLKGVWIVGGSGYPLMDWVMVPYTQQNLTWTQHAFNEKIGEIQRVSREAFARLKARWCCLQKRTEVKLQDLPVVLGACCVLHNICELQNEEMDPELRINLIDDEMIPEIPLRSTTSMKARDAIAHNLLHHGLAGTAFL* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0126 484 MobiDBLite consensus disorder prediction 1 22 - -
Vvi4g0126 484 Pfam DDE superfamily endonuclease 273 429 IPR027806 -
Vvi4g0126 484 PANTHER UNCHARACTERIZED 85 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0126 Vvi-Chr4 1129965 1131419 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0126 - - vvi:100262760 946.806