Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0123 ATGGACTCCGATGCTGCTGAAGACTCCTCTCCAATGGCTACTCTCCTCCCTCTCGCCTCCGTCTCTCAACAACCCTACGTCTCCGAACTCCTCTCCTTCACACTCGATCGCCTCCACAAGGAACCAGAGCTTCTTAGAGTTGATGCTGAACGAATTCGTCGGCAAATGCAAGAGGTGGCAGTTAATAATTACCGTGCATTCATTTCTGCCGCTGATGCTTTACTAGCAATTCGAGAGGAAGTATCTTCTGTGGATAAACACCTAGAGTCTCTGATAAATGAAATACCAAAGCTGACATCTGGTTGCACTGAGTTCATTGAGTCTGCAGAACAGATTTTGGAGGAGAGAAAGATGAACCAAACATTGCTAGCCAATCATAGTACTTTGCTTGACTTGCTTGAAATTCCTCAGCTCATGGACACATGTGTACGGAACGGCAATTATGATGAGGCTCTTGATTTAGAGGCTTTTGTTTGCAAACTTTCAACAATGCACCCAAAATTGCCAGTCATTCAAGCACTGGCTGCAGAAGTTAGGCAAACAACCCAATCTCTTCTTCATCAGCTTCTCCAGAAACTTCGATCAAATATTCTGTTACCAGATTGTCTCCGCATTATTGGATATTTACGTCGAATAGGAGTATTTAGTGAGTTTGAAATGCGTTTACAGTTTTTGAGATGCCGAGAAGCATGGCTCACTGGAATTCTTGATGATTTGGACCAAAAAAATGCTTATGATTACTTAAAAGGGATGGTAAACTGTCAGAGGATGCATCTCTTTGATGTTGTTAACCAATACCGAGCCATATTTGCTGATGATACATCAGGAAGTGAAGAAAACTATGATGGTGGACTTCTTTTTAGTTGGGCTATGCATCAGATAACATCTCACCTTAGAACTCTGAAAGCCATGCTCCCCAAGATAACTGAAGGCGGGTCTTTGTCAAATATCCTGGACCAGTGCATGTATTGTGCAATGGGACTTGGTTGGGTTGGACTGGATTTTCGGGGATTGCTCCCATCTCTTTTTGAAGAGGCAGTTCTCAATTTATTCTCAAAGAATATGAATACAGCTATAGAGAATTTTCAGTTAGTATTAGATTCACATCGTTGGGTACCATTGCCAGCTGTTGGCTTCCCTTCTGGTGGCGTAGGTGAAGAAACTCGGGAGGATGTGACCCCCCCATCTTATTTAATGGAGCATCCACCTCTTGCAGTGTTTGTTAATGGTGTATCTGCAGCGATGAATGAGCTACGGCCCTGTGCTCCAATAAGCTTAAAACACGTGCTTGCGCAAGAATTGATCAACGGATTGCGGGCTGTTTCCAATTCCTTATTGAGGTACAACGCGTCTCGGATGCTCAGAGAAAACGAATCACTTCTTTTCCTCTCACTTTGCCGAGCATTCATCGAGGTTGCTTATCCACACTGTGCCACTTGCTTTGGCCGCTGCTACCCAGGCGGAGCTGCTCTCATCATGGACGCAAAGAACTTGTACGACGGAATTGGCAACCTATTAGCAGTTTCCGCCTCAAGAGAACTCCCCAAATCAGTGACCACCACAGAGGAGAACAGTGTAACAGTAACGGAAAACGGCAACCTGCCCAACGAAGAGAATGGAGTCATGCCTGAAACGGAGCAGGCTCTAAATGGCAAAGTAGATGAGGAGGAGGAGAATGACCTCACTTCCCTAACTGAAAAACCTGCGGATGAATGA 1716 0.4481 MDSDAAEDSSPMATLLPLASVSQQPYVSELLSFTLDRLHKEPELLRVDAERIRRQMQEVAVNNYRAFISAADALLAIREEVSSVDKHLESLINEIPKLTSGCTEFIESAEQILEERKMNQTLLANHSTLLDLLEIPQLMDTCVRNGNYDEALDLEAFVCKLSTMHPKLPVIQALAAEVRQTTQSLLHQLLQKLRSNILLPDCLRIIGYLRRIGVFSEFEMRLQFLRCREAWLTGILDDLDQKNAYDYLKGMVNCQRMHLFDVVNQYRAIFADDTSGSEENYDGGLLFSWAMHQITSHLRTLKAMLPKITEGGSLSNILDQCMYCAMGLGWVGLDFRGLLPSLFEEAVLNLFSKNMNTAIENFQLVLDSHRWVPLPAVGFPSGGVGEETREDVTPPSYLMEHPPLAVFVNGVSAAMNELRPCAPISLKHVLAQELINGLRAVSNSLLRYNASRMLRENESLLFLSLCRAFIEVAYPHCATCFGRCYPGGAALIMDAKNLYDGIGNLLAVSASRELPKSVTTTEENSVTVTENGNLPNEENGVMPETEQALNGKVDEEEENDLTSLTEKPADE* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0123 571 Pfam Dor1-like family 27 360 IPR007255 GO:0017119
Vvi4g0123 571 MobiDBLite consensus disorder prediction 549 571 - -
Vvi4g0123 571 PIRSF COG8 3 570 IPR016632 GO:0017119
Vvi4g0123 571 SUPERFAMILY Cullin repeat-like 128 346 IPR016159 -
Vvi4g0123 571 PANTHER CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 8 7 558 IPR007255 GO:0017119
Vvi4g0123 571 MobiDBLite consensus disorder prediction 516 571 - -
Vvi4g0123 571 MobiDBLite consensus disorder prediction 516 540 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0123 K20295 - vvi:100245590 1118.61