Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0115 ATGCCACGCGCCGCCTCTTTCCTCCCTCTCAATTCCTCCTCCGCAACCACTGCCACCACCTACTCCAAGGATGAAAAGTCCAAAAGGCCCTTACTCACCACTTCGACATCCAATGCTCGCCTACCCCTATTAGTCTTTTGCTTCATCTCTCTCACCATCGGCCTCGCCGGGACTATCTTCGCCGTCTCCGCCCTCAGCCGCCCCCGACCCTTGCCCGTATTCCGCTGCGGCCGCATCCAGGACACCTTCCGTGCATTCTACTCCCTTTCCAATCCTCAGCCGGATCTACTCGACCGCCCCAAAGTCCTCGGCTTTGTTGGAATTCAGACTGGGTTTTCCTCAGCCAGCCGCCGATCTGCTCTCCGGAGCACTTGGTTCCCCTCCGATCCCGATGGGCTTCTCCGATTGGAACAAGCTACTGGTTTAGCCTTTAGGTTCGTGATTGGAAGGTCCAAAGATGTGAAGAAGATGGCAGAGTTGCAGAAAGAGGTGGAGAAGTACAAAGATTTCATGCTTATAGACGTTCGGGAAGAATACCTAAACCTCCCACACAAAACTTTGGCATTTTTCAAAGCAGCATTTGAACTCTTTGATGCAGATTATTATGTCAAAGCTGATGACGACATTTATTTGCGTCCAGATCGACTCTCCACCCTTCTAGCTAAGGAGCGAAGCCATTCGCAAACTTACATTGGGTGCATGAAGAAAGGGCCAGTCATCACTGACCCTAAAATGAAATGGTATGAGAAATCAGGACATCTGATTGGAAATGAATACTTCTTGCATGCTTATGGTCCTATATATGTTCTATCTAAGGAGGTGGTGGCTTCATTGGCAGCTGCTAGAAATAACAGTTTGAGAATGTTTAACAATGAGGATGTCACTATTGGATCATGGATGCTTGCCATGAATGTCCATCATGAAGATAACCGAGCAATATGTGATCCTCGATGCACACCAACATCTATTGCTGTCTGGGACATCCCAAAATGTTCAGGTTTATGCAACCCAACCAGCAGGCTGAAGGAGCTTCACAAGATGGGCATGTGCTCTAAAAGCCCAACGCTGCCACCAGATGATAGGTAG 1086 0.489 MPRAASFLPLNSSSATTATTYSKDEKSKRPLLTTSTSNARLPLLVFCFISLTIGLAGTIFAVSALSRPRPLPVFRCGRIQDTFRAFYSLSNPQPDLLDRPKVLGFVGIQTGFSSASRRSALRSTWFPSDPDGLLRLEQATGLAFRFVIGRSKDVKKMAELQKEVEKYKDFMLIDVREEYLNLPHKTLAFFKAAFELFDADYYVKADDDIYLRPDRLSTLLAKERSHSQTYIGCMKKGPVITDPKMKWYEKSGHLIGNEYFLHAYGPIYVLSKEVVASLAAARNNSLRMFNNEDVTIGSWMLAMNVHHEDNRAICDPRCTPTSIAVWDIPKCSGLCNPTSRLKELHKMGMCSKSPTLPPDDR* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0115 361 SUPERFAMILY Nucleotide-diphospho-sugar transferases 180 302 IPR029044 -
Vvi4g0115 361 FunFam Hexosyltransferase 101 332 - -
Vvi4g0115 361 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 94 315 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vvi4g0115 361 Pfam Galactosyltransferase 116 310 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vvi4g0115 361 Gene3D - 97 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0115 Vvi-Chr4 1044898 1048486 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0115 22 336 Glycosyltransferase AT2G26100 69.159 4.34e-164 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0115 - - vvi:100257718 726.472