Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0113 ATGTCTATACCGTCGATCTGGGCTTCCATGAACAGCTGGTTCACACCCGCTGTCCTCTTCCTCCTCCTCAACCTGATGATCGGTACCATTTTTGTTACCTCTGGTCTGGGGACTCAAAGACCCCATCAGCAACCTCGGGACAGCTCCCAAGACCCACAGCCCCAGCTTCCCAGATCTCCCTCTGTGTTGCAGAGGCTCAAGTCCATTAACTTCTACAGCTACAGGTCTCAGGAACCCACCACCATTTACGGTCAGATTCAGGGGCGGCCCTTTGAGAGGACCAAGTCGGATCAGGAGCCGGCGTCCGGTGAAACTCCAGTGAGGCTGTCTAAGAAGATGAAGAAGTCGGCGAGTGCGAAGTCGACATTCGCGCATTTTGAGGAGGGTGACATTGTGGAGAGTCGCCGACCGGCGACTGTGAGGGAGGGGAAGGCTAAAGCGACGGTGGCGGAGGGTGACGAAGACGATGAGGAGGTGGACGCGAAGGCCGACGACTTCATCAACAAGTTCAAGCAGCAATTGAAGTTGCAGAGGCTGGATTCGATCATAAGGTACAAGGAGATGATCGGAAGAGGGACTGGAAAGTAA 588 0.5476 MSIPSIWASMNSWFTPAVLFLLLNLMIGTIFVTSGLGTQRPHQQPRDSSQDPQPQLPRSPSVLQRLKSINFYSYRSQEPTTIYGQIQGRPFERTKSDQEPASGETPVRLSKKMKKSASAKSTFAHFEEGDIVESRRPATVREGKAKATVAEGDEDDEEVDAKADDFINKFKQQLKLQRLDSIIRYKEMIGRGTGK* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0113 195 MobiDBLite consensus disorder prediction 83 114 - -
Vvi4g0113 195 Pfam Domain of unknown function (DUF4408) 4 35 IPR025520 -
Vvi4g0113 195 PANTHER COTTON FIBER (DUF761) 3 193 - -
Vvi4g0113 195 MobiDBLite consensus disorder prediction 37 60 - -
Vvi4g0113 195 MobiDBLite consensus disorder prediction 134 151 - -
Vvi4g0113 195 Pfam Cotton fibre expressed protein 156 190 IPR008480 -
Vvi4g0113 195 MobiDBLite consensus disorder prediction 134 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0113 Vvi-Chr4 1028936 1029670 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0113 - - vvi:100249297 286.574