Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0111 ATGACAGACAGAGTGTACCCATCTTCCAAACCCACCACCACCGGTGCTGCACCCGGTGGAACCACAGCGCCAGCCGCGGCCCCGGCGAAATCCCACCTCTATAACCCCACTCGCCCGACGTACCGCCCACAAGCACACCGCCGGCGTCCCCGCCGGTCGTGCCGGAGCATCTGCTGCTGCTGCTTTTTCTGGTTTCTTCTCGTGCTTCTCCTGTTGATCCTCCTGGCCGCCACCGCCGGCGCGGCGCTTTGGGTGTTCTACCGCCCCCACAGCCCGACCTTCTCAGTCTCCACCTTCAAGACAACTCAATTCAACCTCTCCGCTTCCTCCGCCGACGCGTCCTCCTCCGGCCATCTCTCCGCCGCCTTCAACCTCACCATCGCCGCCCGCAACCCCAACAAGAAAATCACCATTTTCTACGACCCCTTCACTGTTTCCATCTCATCGAACGACGTCATCCTCGCCAACGGATCCTACCCAGCATTCGCCAGCAGCCCCAAGGACTTCACAGTCCTGAAACCCACTCTCTCCAGCCACTCCCGCGACCTGGACGCGGATTCAGTGACTTCCCTGAGATCAGATCTGAAGAAGAAAAGTGGGTTGCCTCTGGAATTTCAAATGGACACGAAGGTGAAGATCAAAATGGGAGGGTTTAAGAGCAGCAAGGTGGGAATCAGAGTGACCTGCGATGGCATCCAAGCTGCAGTTCCAAAAGGTAAATCTCCATCAGTTGCTTCAACTTCTGACTCCAGGTGTGAGGTTGATCTCAGAATCAAGATCTGGAAATGGACCTTCTGA 798 0.5714 MTDRVYPSSKPTTTGAAPGGTTAPAAAPAKSHLYNPTRPTYRPQAHRRRPRRSCRSICCCCFFWFLLVLLLLILLAATAGAALWVFYRPHSPTFSVSTFKTTQFNLSASSADASSSGHLSAAFNLTIAARNPNKKITIFYDPFTVSISSNDVILANGSYPAFASSPKDFTVLKPTLSSHSRDLDADSVTSLRSDLKKKSGLPLEFQMDTKVKIKMGGFKSSKVGIRVTCDGIQAAVPKGKSPSVASTSDSRCEVDLRIKIWKWTF* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0111 265 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 20 240 - -
Vvi4g0111 265 Pfam Late embryogenesis abundant protein 126 229 IPR004864 -
Vvi4g0111 265 SUPERFAMILY LEA14-like 69 214 - -
Vvi4g0111 265 MobiDBLite consensus disorder prediction 1 46 - -
Vvi4g0111 265 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0111 Vvi-Chr4 1005517 1006314 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0111 47 258 EF-hand Containing Proteins AT5G21130 27.700 4.47e-17 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0111 - - vvi:100254397 434.491