Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0106 ATGGCTCATTTGCTTTCAACTTCTTGTTCTCTGAAAATAACCTCCTGTAGGAAGCCTCACTCCAAACAATTGAATGAAAGCTCAAATGCATTTCCTGCATATTTTTCTTTAAAGACCACCAAGGATTTGTACTGTCCATTTGGGAGTTTTGTTGTGCAACGAGGGAAACAACGAAGGATTTGTACTGTCCGTGCGACGACTCTGCCTTTAGATCAAGAAGCTCCAACACAACCTGGCTCTGTCTTTCATCAAAACTCCAATGGACCATCTCCGCCAAAGCGGGTGATGGTCATTGGTGGAGATGGCTACTGTGGTTGGGCCACTGCCCTCCACCTATCCAACAAGAATTACGAAGTTGCCATTGTTGACAACCTAGTGCGCCGCCTCTTTGACCATCAGCTTGGTCTTGATTCCCTGACTCCTATTTCTTCCATCCACAACCGCATTCGGAGATGGAAATCTCTCACTGGAAAATCCATCCAGCTCTACATTGGTGATATATGTGACTTTGAGTTCTTATCAGAAAGCTTTAAGTCATTTGAGCCTGATGCAGTTGTTCATTTTGGGGAACAGAGGTCTGCCCCATACTCCATGATTGATCGGTCAAGAGCTGTGTTCACTCAGCACAATAATGTGATAGGAACGCTCAATGTTCTTTTTGCTATCAAGGAGTTCAGAGAGCAGTGTCATCTAGTGAAGCTTGGCACAATGGGAGAATATGGAACTCCAAACATTGATATTGAAGAGGGTTACATAACTATTACTCATAATGGAAGAACAGATACTTTGCCTTATCCCAAGCAAGCCAGTTCTTTCTATCATCTGAGCAAGGTCCATGATTCGAACAACATAGCTTTTACTTGCAAGGCTTGGGGGATAAGAGCCACCGATCTGAATCAAGGAGTAGTTTATGGGGTGAGGACAGACGAGACTGAAATGCATGAGGAGCTCTGTAATAGGTTTGATTATGATGGTGTGTTTGGAACTGCACTTAACCGATTTTGTGTTCAGGCTGCTGTTGGACATCCACTTACTGTGTATGGCAAAGGGGGCCAGACCAGGGGATACCTTGACATAAGAGATACAGTTCAATGTGTTGAGCTTGCCATTGCAAACCCAGCACAGCGAGGCGAGTTTCGGGTCTTCAATCAATTTACAGAGCAATTTTCTGTCAATGATCTTGCCACCCTTGTTACAAAAGCAGGGAAAAAGCTCGGGCTTGATGTGCAAACCATATCTGTGCCCAACCCTAGGGTAGAAGCAGAGGAGCATTACTACAACGCCAAGCACACTAAGCTCATTGAGTTGGGATTGAAACCACATCTTCTTTCCGACTCTCTTCTGGATTCATTGCTCAACTTTGCTGTCAAGTTCAAGGATCGTGTTGACACAAAACAGATCATGCCCAGCGTTTCTTGGAGAAAGATTGGTGTCAAGCCAAAGACCGTTTCTGCTTGA 1458 0.4458 MAHLLSTSCSLKITSCRKPHSKQLNESSNAFPAYFSLKTTKDLYCPFGSFVVQRGKQRRICTVRATTLPLDQEAPTQPGSVFHQNSNGPSPPKRVMVIGGDGYCGWATALHLSNKNYEVAIVDNLVRRLFDHQLGLDSLTPISSIHNRIRRWKSLTGKSIQLYIGDICDFEFLSESFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFREQCHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSNNIAFTCKAWGIRATDLNQGVVYGVRTDETEMHEELCNRFDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVELAIANPAQRGEFRVFNQFTEQFSVNDLATLVTKAGKKLGLDVQTISVPNPRVEAEEHYYNAKHTKLIELGLKPHLLSDSLLDSLLNFAVKFKDRVDTKQIMPSVSWRKIGVKPKTVSA* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0106 485 CDD SQD1_like_SDR_e 94 474 - -
Vvi4g0106 485 PANTHER DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED 91 458 - -
Vvi4g0106 485 Gene3D - 301 462 - -
Vvi4g0106 485 Pfam NAD dependent epimerase/dehydratase family 95 383 IPR001509 -
Vvi4g0106 485 Gene3D - 94 385 - -
Vvi4g0106 485 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 93 461 IPR036291 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0106 1 484 Acyl Lipid Metabolism Gene Families AT4G33030 78.029 0.0 764
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0106 K06118 - vvi:100242408 962.985