Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0105 ATGTCGGTGACTCGGCCGAGTCCAACTCACCTTGAACGAGTCGGCCCTCCAGTAATTAAACAACAAAGAGTTGTGATACAGAACCAACATGGTGAGAAGCTTGTGGGCATATCCCATGAAATAGGCTCCAAGGAGCTTGTGATCTTATGCCATGGATTTCGATCCTCGAAGGAGCGCATTCCTATGGTGAACCTTGCTGCTGCTTTGGGAAAAGAAGGAATCAGTGCCTTCCGCTTTGACTTTGCAGGAAACGGGGAAAGTGAAGGTTCATTTCAGTATGGTAACTACCGTAGGGAAGCTGATGATTTACGTGCTGTAGTACAACACTTTTATGGGGAAAAACGTGTAATTATTGCACTTGTTGGACATAGTAAAGGAGGAAATGTGGTGCTGTTGTATGCTTCAAAATATAATGATGTCCATACCATTGTGAACATTTCTGGCCGCTTTTATCTGGAGAGAGGCATTAAAGGTCGTTTAGGTCAAGATTTTTTACAAAGAATCAAGCAAAATGGATTTATTGATGTTAAGAATAAAGGGGGGAAGTTTCAGTATCGTGTGACTGAAGAAAGTTTGATAGACCGTCTAACTACGGATACTCATGCAACATGCCTCTTGATTCAAAAGGATTGCAGAGTGTTTACGGTTCATGGTTCCTGTGATGAAATGGTGCCAGTGGAAGATGCTTTGGCGTTCGCCAACATCATACCCAATCACAAGCTACACATTATAGAAGGGGCTGATCATGAGTTCACTTCACACCAAGGTGAATTAGCTTCAGTTGTCCTGGACTTTGTAAGATCATATCCACCCTGCAGCAAAGGTATATCTGAGCAGTTACCACGATCATGCATAAGAGCAGATAATTCTACCCGTTCGCGTCTCTGA 888 0.4313 MSVTRPSPTHLERVGPPVIKQQRVVIQNQHGEKLVGISHEIGSKELVILCHGFRSSKERIPMVNLAAALGKEGISAFRFDFAGNGESEGSFQYGNYRREADDLRAVVQHFYGEKRVIIALVGHSKGGNVVLLYASKYNDVHTIVNISGRFYLERGIKGRLGQDFLQRIKQNGFIDVKNKGGKFQYRVTEESLIDRLTTDTHATCLLIQKDCRVFTVHGSCDEMVPVEDALAFANIIPNHKLHIIEGADHEFTSHQGELASVVLDFVRSYPPCSKGISEQLPRSCIRADNSTRSRL* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0105 295 Gene3D alpha/beta hydrolase 18 283 IPR029058 -
Vvi4g0105 295 PANTHER RE40534P-RELATED 19 266 - -
Vvi4g0105 295 FunFam Alpha/beta-Hydrolases superfamily protein 16 276 - -
Vvi4g0105 295 SUPERFAMILY alpha/beta-Hydrolases 6 269 IPR029058 -
Vvi4g0105 295 Pfam Serine aminopeptidase, S33 44 199 IPR022742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0105 Vvi-Chr4 973293 978039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0105 19 139 Acyl Lipid Metabolism Gene Families AT2G39410 32.824 2.27e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0105 K06889 - vvi:100247545 594.734