Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0099 ATGCAAGGTGTGCGGCGCTTCCGGACGTTAACGGAGGGCGGCGTCCGCCTGGAGCTCACTCCCACCACCACCTCCCCGCTGGCCATCGACGTCACTGAATCAACCGAGATGAGGATCCAGCGCCTCATCTCCGAGAACCCAGTCATCATCTTCAGCCGTCCCTCCTGCTGCATGTGCCACGTCATGAAGCGCCTGCTCTCCACCATCGGCGTGCACCCCACCGTCATCGAATTGGACGACGAGGAGATCGGAGCCCTCGCCGCCCACTCCGCCGACTCCACCTCCACCGCCCCCGTCGCCCCCGCCGTCTTCATCGGCGGCACACGTGTCGGAGGCCTGGAGAGCCTCGTGGCCCTCCACCTCAGCGGCCACCTCGTCCCTCGCCTCGTCGAAGTTGGTGCTCTCTGGGTATGA 414 0.6594 MQGVRRFRTLTEGGVRLELTPTTTSPLAIDVTESTEMRIQRLISENPVIIFSRPSCCMCHVMKRLLSTIGVHPTVIELDDEEIGALAAHSADSTSTAPVAPAVFIGGTRVGGLESLVALHLSGHLVPRLVEVGALWV* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0099 137 ProSiteProfiles Glutaredoxin domain profile. 36 136 - -
Vvi4g0099 137 Pfam Glutaredoxin 48 109 IPR002109 -
Vvi4g0099 137 NCBIfam glutaredoxin-like family 39 137 IPR011905 -
Vvi4g0099 137 SUPERFAMILY Thioredoxin-like 38 136 IPR036249 -
Vvi4g0099 137 CDD GRX_GRXh_1_2_like 47 127 - -
Vvi4g0099 137 Gene3D Glutaredoxin 29 136 - -
Vvi4g0099 137 PRINTS Glutaredoxin signature 107 120 IPR014025 -
Vvi4g0099 137 PRINTS Glutaredoxin signature 93 106 IPR014025 -
Vvi4g0099 137 PRINTS Glutaredoxin signature 48 66 IPR014025 -
Vvi4g0099 137 PANTHER GLUTAREDOXIN 38 136 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0099 Vvi-Chr4 932107 932520 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0099 38 137 Miscellaneous Gene Families AT4G15700 45.000 1.16e-27 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0099 - - vvi:100268063 271.166